vg
tools for working with variation graphs
Public Member Functions | Public Attributes | List of all members
vg::MinimizerMapper::Minimizer Struct Reference

#include <minimizer_mapper.hpp>

Public Member Functions

bool operator< (const Minimizer &another) const
 

Public Attributes

gbwtgraph::DefaultMinimizerIndex::minimizer_type value
 
size_t agglomeration_start
 
size_t agglomeration_length
 
size_t hits
 
const gbwtgraph::DefaultMinimizerIndex::code_type * occs
 
size_t origin
 
double score
 

Detailed Description

We define our own type for minimizers, to use during mapping and to apss around between our internal functions.

Member Function Documentation

◆ operator<()

bool vg::MinimizerMapper::Minimizer::operator< ( const Minimizer another) const
inline

Member Data Documentation

◆ agglomeration_length

size_t vg::MinimizerMapper::Minimizer::agglomeration_length

◆ agglomeration_start

size_t vg::MinimizerMapper::Minimizer::agglomeration_start

◆ hits

size_t vg::MinimizerMapper::Minimizer::hits

◆ occs

const gbwtgraph::DefaultMinimizerIndex::code_type* vg::MinimizerMapper::Minimizer::occs

◆ origin

size_t vg::MinimizerMapper::Minimizer::origin

◆ score

double vg::MinimizerMapper::Minimizer::score

◆ value

gbwtgraph::DefaultMinimizerIndex::minimizer_type vg::MinimizerMapper::Minimizer::value

The documentation for this struct was generated from the following file: