vg
tools for working with variation graphs
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#include <minimizer_mapper.hpp>
Public Member Functions | |
bool | operator< (const Minimizer &another) const |
Public Attributes | |
gbwtgraph::DefaultMinimizerIndex::minimizer_type | value |
size_t | agglomeration_start |
size_t | agglomeration_length |
size_t | hits |
const gbwtgraph::DefaultMinimizerIndex::code_type * | occs |
size_t | origin |
double | score |
We define our own type for minimizers, to use during mapping and to apss around between our internal functions.
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inline |
size_t vg::MinimizerMapper::Minimizer::agglomeration_length |
size_t vg::MinimizerMapper::Minimizer::agglomeration_start |
size_t vg::MinimizerMapper::Minimizer::hits |
const gbwtgraph::DefaultMinimizerIndex::code_type* vg::MinimizerMapper::Minimizer::occs |
size_t vg::MinimizerMapper::Minimizer::origin |
double vg::MinimizerMapper::Minimizer::score |
gbwtgraph::DefaultMinimizerIndex::minimizer_type vg::MinimizerMapper::Minimizer::value |