T-COFFEE, Version_11.00 (Version_11.00)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=294
*
 BAD AVG GOOD
*
hmgl_trybr   :  23
hmgt_mouse   :  24
hmgb_chite   :  25
hmgl_wheat   :  26
1cms         :  32
4pep         :  31
4ape         :  32
3app         :  31
2apr         :  33
1cms_1       :  17
cons         :  29

hmgl_trybr   kkds------na-----------------p-------------kramtsfm-----ffssd-------------------------------f----rskhs------d---------lsivemsk-aagaaw---------------ke
hmgt_mouse   -----------k-----------------p-------------krprsayn-----iyvse-------------------------------s----fqeakd-dsaqg---------k-----lk-lvneaw---------------kn
hmgb_chite   ---a------dk-----------------p-------------krplsaym-----lwlns-------------------------------a----resikr-enpdf---------k-vtevak-kggelw---------------rg
hmgl_wheat   --dp------nk-----------------p-------------krapsaff-----vfmge-------------------------------f----reefkq-knpkn---------ksvaavgk-aagerw---------------ks
1cms         -----GEVASVP-LTNYLDSQY-----FGKIYLG------TPPQEFTVLFDTGSSDFWVPSIY-----------------------------CKSNACKNHQR-FDPRK---------SS---TF-QNLGKPLSIHYGTGS-MQGILGYD
4pep         -------IGDEP-LENYLDTEY-----FGTIGIG------TPAQDFTVIFDTGSSNLWVPSVY-----------------------------CSSLACSDHNQ-FNPDD---------SS---TF-EATSQELSITYGTGS-MTGILGYD
4ape         ----STGSATTT-PIDSLDDAY-----ITPVQIG------TPAQTLNLDFDTGSSDLWVFSSE-----------------------------TTASEVDGQTI-YTPSK---------ST---TAKLLSGATWSISYGDGSSSSGDVYTD
3app         ---AASGVATNT-PTAN-DEEY-----ITPVTIG--------GTTLNLNFDTGSADLWVFSTE-----------------------------LPASQQSGHSV-YNPS-----------A---TGKELSGYTWSISYGDGSSASGNVFTD
2apr         ---AGVGTVPMT-DYGN-DIEY-----YGQVTIG------TPGKKFNLDFDTGSSDLWIASTL-----------------------------CTNCG-SGQTK-YDPNQ---------SS---TY-QADGRTWSISYGDGSSASGILAKD
1cms_1       ----YTGSLHWVPVTV----QQYWQFTVDSVTISGVVVACEGGCQA--ILDTGTSKLVGPSSDILNIQQAIGATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQDQGFCTS---GFQ-SENHSQKWIL-------GDVF--

cons                                                                 .   .                                     .                              .                    


hmgl_trybr   ---------------lgpeerkvyeemaekd---ke----------r--------ykrem------------------------------------
hmgt_mouse   ---------------lspeekqayiqlakdd---ri----------r--------ydnem-ks----------weeq--mae--------------
hmgb_chite   ---------------lkd--kseweakaata---kq----------n--------yiral-qe----------yern--gg---------------
hmgl_wheat   ---------------lsesekapyvakankl---kg----------e--------ynkai-aa----------ynkg--esa--------------
1cms         TVTVSNIVDIQQTVGLSTQEPGDVFTYAEFD---GILGMAYPSLASEY---SIPVFDNMMNRHLVAQDLFSVYMDRN---GQE-SMLTLGAIDPSY
4pep         TVQVGGISDTNQIFGLSETEPGSFLYYAPFD---GILGLAYPSISASG---ATPVFDNLWDQGLVSQDLFSVYLSSN---DDSGSVVLLGGIDSSY
4ape         TVSVGGLTVTGQAVESAKKVSSSFTEDSTID---GLLGLAFSTLNTVSPTQQKTFFDN-AKAS-LDSPVFTADLGYH---AP--GTYNFGFIDTTA
3app         SVTVGGVTAHGQAVQAAQQISAQFQQDTNND---GLLGLAFSSINTVQPQSQTTFFDT-VKSS-LAQPLFAVALKHQ---QP--GVYDFGFIDSSK
2apr         NVNLGGLLIKGQTIELAKREAASFASGPN-D---GLLGLGFDTITTVRG--VKTPMDNLISQGLISRPIFGVYLGKAKNGGG--GEYIFGGYDSTK
1cms_1       -------------I------REY---YSVFDRANNLVGLA-------------------------------------------------KAI----

cons                                    .