Package org.snpeff.osCmd
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Interface Summary Interface Description LineFilter Filter a line before processingProgress -
Class Summary Class Description ExecuteOsCommand Launches an 'OS command' (e.g.OsCmdQueue A queue of commands to be run.OsCmdRunner Run an OS command as a threadStreamGobbler Read the contents of a stream in a separate thread This class is used when executing OS commands in order to read STDOUT / STDERR and prevent process blocking It can alert an AlertListener when a given string is in the stream