Package org.snpeff
Enum SnpEff.GeneDatabaseFormat
- java.lang.Object
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- java.lang.Enum<SnpEff.GeneDatabaseFormat>
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- org.snpeff.SnpEff.GeneDatabaseFormat
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- All Implemented Interfaces:
java.io.Serializable
,java.lang.Comparable<SnpEff.GeneDatabaseFormat>
- Enclosing class:
- SnpEff
public static enum SnpEff.GeneDatabaseFormat extends java.lang.Enum<SnpEff.GeneDatabaseFormat>
Available gene database formats
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static SnpEff.GeneDatabaseFormat
valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.static SnpEff.GeneDatabaseFormat[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Detail
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BIOMART
public static final SnpEff.GeneDatabaseFormat BIOMART
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GFF3
public static final SnpEff.GeneDatabaseFormat GFF3
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GFF2
public static final SnpEff.GeneDatabaseFormat GFF2
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GTF22
public static final SnpEff.GeneDatabaseFormat GTF22
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REFSEQ
public static final SnpEff.GeneDatabaseFormat REFSEQ
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KNOWN_GENES
public static final SnpEff.GeneDatabaseFormat KNOWN_GENES
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GENBANK
public static final SnpEff.GeneDatabaseFormat GENBANK
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EMBL
public static final SnpEff.GeneDatabaseFormat EMBL
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Method Detail
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values
public static SnpEff.GeneDatabaseFormat[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (SnpEff.GeneDatabaseFormat c : SnpEff.GeneDatabaseFormat.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
public static SnpEff.GeneDatabaseFormat valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
java.lang.IllegalArgumentException
- if this enum type has no constant with the specified namejava.lang.NullPointerException
- if the argument is null
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