Package org.snpeff.pdb
Class IdMapperEntry
- java.lang.Object
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- org.snpeff.pdb.IdMapperEntry
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- All Implemented Interfaces:
java.lang.Cloneable
,java.lang.Comparable<IdMapperEntry>
public class IdMapperEntry extends java.lang.Object implements java.lang.Cloneable, java.lang.Comparable<IdMapperEntry>
An entry in a ID mapping file- Author:
- pcingola
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Field Summary
Fields Modifier and Type Field Description int
pdbAaLen
java.lang.String
pdbChainId
java.lang.String
pdbId
int
trAaLen
java.lang.String
trId
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Constructor Summary
Constructors Constructor Description IdMapperEntry(java.lang.String pdbId, java.lang.String trId)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description IdMapperEntry
cloneAndSet(java.lang.String chainId, int pdbAaLen, int trAaLen)
Clone the object and return a copy having a different chain IDint
compareTo(IdMapperEntry o)
java.lang.String
toString()
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Method Detail
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cloneAndSet
public IdMapperEntry cloneAndSet(java.lang.String chainId, int pdbAaLen, int trAaLen)
Clone the object and return a copy having a different chain ID
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compareTo
public int compareTo(IdMapperEntry o)
- Specified by:
compareTo
in interfacejava.lang.Comparable<IdMapperEntry>
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toString
public java.lang.String toString()
- Overrides:
toString
in classjava.lang.Object
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