Uses of Class
org.snpeff.interval.TranscriptSupportLevel
-
Packages that use TranscriptSupportLevel Package Description org.snpeff org.snpeff.interval org.snpeff.snpEffect -
-
Uses of TranscriptSupportLevel in org.snpeff
Fields in org.snpeff declared as TranscriptSupportLevel Modifier and Type Field Description protected TranscriptSupportLevel
SnpEff. maxTranscriptSupportLevel
-
Uses of TranscriptSupportLevel in org.snpeff.interval
Methods in org.snpeff.interval that return TranscriptSupportLevel Modifier and Type Method Description TranscriptSupportLevel
Transcript. getTranscriptSupportLevel()
static TranscriptSupportLevel
TranscriptSupportLevel. parse(java.lang.String str)
static TranscriptSupportLevel
TranscriptSupportLevel. valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.static TranscriptSupportLevel[]
TranscriptSupportLevel. values()
Returns an array containing the constants of this enum type, in the order they are declared.Methods in org.snpeff.interval with parameters of type TranscriptSupportLevel Modifier and Type Method Description void
Gene. filterTranscriptSupportLevel(TranscriptSupportLevel maxTsl)
Filter transcripts by TSLvoid
Transcript. setTranscriptSupportLevel(TranscriptSupportLevel transcriptSupportLevel)
static int
TranscriptSupportLevel. tsl(TranscriptSupportLevel tsl)
Return TSL level (-1 if not available / invalid) -
Uses of TranscriptSupportLevel in org.snpeff.snpEffect
Methods in org.snpeff.snpEffect with parameters of type TranscriptSupportLevel Modifier and Type Method Description void
SnpEffectPredictor. filterTranscriptSupportLevel(TranscriptSupportLevel maxTsl)
Filter transcripts by TSL
-