Package org.snpeff.geneSets.algorithm
Class FisherPValueAlgorithm
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- org.snpeff.geneSets.algorithm.EnrichmentAlgorithm
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- org.snpeff.geneSets.algorithm.FisherPValueAlgorithm
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public class FisherPValueAlgorithm extends EnrichmentAlgorithm
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Nested Class Summary
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Nested classes/interfaces inherited from class org.snpeff.geneSets.algorithm.EnrichmentAlgorithm
EnrichmentAlgorithm.EnrichmentAlgorithmType
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Field Summary
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Fields inherited from class org.snpeff.geneSets.algorithm.EnrichmentAlgorithm
HTML_BG_COLOR, HTML_BG_COLOR_TITLE, HTML_TD_GENES_MAX_LEN, PRINT_SOMETHING_TIME
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Constructor Summary
Constructors Constructor Description FisherPValueAlgorithm(GeneSets geneSets, int numberToSelect)
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Method Summary
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Methods inherited from class org.snpeff.geneSets.algorithm.EnrichmentAlgorithm
getMaxPvalueAdjusted, getOutput, isShow, print, select, setDebug, setFilterOutputGeneSets, setHtmlTable, setMaxGeneSetSize, setMaxPValue, setMaxPvalueAdjusted, setMinGeneSetSize, setVerbose
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Constructor Detail
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FisherPValueAlgorithm
public FisherPValueAlgorithm(GeneSets geneSets, int numberToSelect)
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