Package org.snpeff.reactome
Class GeneIds
- java.lang.Object
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- org.snpeff.reactome.GeneIds
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public class GeneIds extends java.lang.Object
Maps different Gene IDs: - ENSEMBL Gene ID to transcript ID - ENSEMBL Gene ID to Gene Name - ENSEMBL Gene ID to Refseq Gene ID - ENSEMBL Gene ID to Refseq Protein ID- Author:
- pcingola
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Constructor Summary
Constructors Constructor Description GeneIds(java.lang.String fileName)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description IdMap
getId2geneName()
IdMap
getId2refseqId()
IdMap
getId2refseqProtId()
IdMap
getId2tr()
protected void
load(java.lang.String fileName)
Load data from file
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