Package org.broad.igv.bbfile
Class BigWigSectionHeader
- java.lang.Object
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- org.broad.igv.bbfile.BigWigSectionHeader
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public class BigWigSectionHeader extends java.lang.Object
Created by IntelliJ IDEA. User: martind Date: Jan 6, 2010 Time: 3:00:11 PM To change this template use File | Settings | File Templates.
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Nested Class Summary
Nested Classes Modifier and Type Class Description static class
BigWigSectionHeader.WigItemType
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Field Summary
Fields Modifier and Type Field Description static int
BEDGRAPH_ITEM_SIZE
static int
FIXEDSTEP_ITEM_SIZE
static int
SECTION_HEADER_SIZE
static int
VARSTEP_ITEM_SIZE
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Constructor Summary
Constructors Constructor Description BigWigSectionHeader(java.io.DataInputStream bdis)
BigWigSectionHeader(LittleEndianInputStream lbdis)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description int
getChromID()
int
getChromosomeEnd()
int
getChromosomeStart()
short
getItemCount()
int
getItemSpan()
int
getItemStep()
BigWigSectionHeader.WigItemType
getItemType()
byte
getReserved()
boolean
IsValidType()
void
print()
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Field Detail
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SECTION_HEADER_SIZE
public static final int SECTION_HEADER_SIZE
- See Also:
- Constant Field Values
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FIXEDSTEP_ITEM_SIZE
public static final int FIXEDSTEP_ITEM_SIZE
- See Also:
- Constant Field Values
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VARSTEP_ITEM_SIZE
public static final int VARSTEP_ITEM_SIZE
- See Also:
- Constant Field Values
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BEDGRAPH_ITEM_SIZE
public static final int BEDGRAPH_ITEM_SIZE
- See Also:
- Constant Field Values
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Constructor Detail
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BigWigSectionHeader
public BigWigSectionHeader(LittleEndianInputStream lbdis)
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BigWigSectionHeader
public BigWigSectionHeader(java.io.DataInputStream bdis)
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Method Detail
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getChromID
public int getChromID()
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getChromosomeStart
public int getChromosomeStart()
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getChromosomeEnd
public int getChromosomeEnd()
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getItemStep
public int getItemStep()
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getItemSpan
public int getItemSpan()
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getItemType
public BigWigSectionHeader.WigItemType getItemType()
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IsValidType
public boolean IsValidType()
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getItemCount
public short getItemCount()
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getReserved
public byte getReserved()
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print
public void print()
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