Class SmithWaterman


  • public class SmithWaterman
    extends NeedlemanWunsch
    Smith-Waterman (local sequence alignment) algorithm for sequence alignment (short strings, since it's not memory optimized)
    Author:
    pcingola
    • Constructor Detail

      • SmithWaterman

        public SmithWaterman​(java.lang.String a,
                             java.lang.String b)