Class TestCasesIntegrationHgvsUpDownStream

    • Constructor Detail

      • TestCasesIntegrationHgvsUpDownStream

        public TestCasesIntegrationHgvsUpDownStream()
    • Method Detail

      • test_01_hgvs_upstream

        public void test_01_hgvs_upstream()
        Test for HGVS.C notation on upstream variants
      • test_02_hgvs_downstream

        public void test_02_hgvs_downstream()
        Test for HGVS.C notation on downstream variants
      • test_03_hgvs_upstream_del

        public void test_03_hgvs_upstream_del()
        Test that CSV summary does not throw any error
      • test_04_hgvs_upstream_negative_strand

        public void test_04_hgvs_upstream_negative_strand()
        Test HGVS.C upstream of a variant affecting a transcript on the negative strand
      • test_05_hgvs_downstream_negative_strand

        public void test_05_hgvs_downstream_negative_strand()
        Test HGVS.C upstream of a variant affecting a transcript on the negative strand