Class Intergenic

  • All Implemented Interfaces:
    java.io.Serializable, java.lang.Cloneable, java.lang.Comparable<Interval>, TxtSerializable

    public class Intergenic
    extends Marker
    Interval for in intergenic region
    Author:
    pcingola
    See Also:
    Serialized Form
    • Constructor Detail

      • Intergenic

        public Intergenic()
      • Intergenic

        public Intergenic​(Chromosome parent,
                          int start,
                          int end,
                          boolean strandMinus,
                          java.lang.String id,
                          java.lang.String name)
    • Method Detail

      • createIntergenic

        public static Intergenic createIntergenic​(Gene geneLeft,
                                                  Gene geneRight)
        Creates an intergenic marker based on the "space" between two genes
        Returns:
        null if the marker cannot be created
      • getName

        public java.lang.String getName()