Package org.snpeff.snpEffect
Enum VariantEffect.ErrorWarningType
- java.lang.Object
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- java.lang.Enum<VariantEffect.ErrorWarningType>
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- org.snpeff.snpEffect.VariantEffect.ErrorWarningType
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- All Implemented Interfaces:
java.io.Serializable
,java.lang.Comparable<VariantEffect.ErrorWarningType>
- Enclosing class:
- VariantEffect
public static enum VariantEffect.ErrorWarningType extends java.lang.Enum<VariantEffect.ErrorWarningType>
Errors for change effect
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Enum Constant Summary
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
isError()
boolean
isWarning()
static VariantEffect.ErrorWarningType
valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.static VariantEffect.ErrorWarningType[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Detail
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INFO_REALIGN_3_PRIME
public static final VariantEffect.ErrorWarningType INFO_REALIGN_3_PRIME
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WARNING_SEQUENCE_NOT_AVAILABLE
public static final VariantEffect.ErrorWarningType WARNING_SEQUENCE_NOT_AVAILABLE
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WARNING_REF_DOES_NOT_MATCH_GENOME
public static final VariantEffect.ErrorWarningType WARNING_REF_DOES_NOT_MATCH_GENOME
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WARNING_TRANSCRIPT_INCOMPLETE
public static final VariantEffect.ErrorWarningType WARNING_TRANSCRIPT_INCOMPLETE
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WARNING_TRANSCRIPT_MULTIPLE_STOP_CODONS
public static final VariantEffect.ErrorWarningType WARNING_TRANSCRIPT_MULTIPLE_STOP_CODONS
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WARNING_TRANSCRIPT_NO_START_CODON
public static final VariantEffect.ErrorWarningType WARNING_TRANSCRIPT_NO_START_CODON
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WARNING_TRANSCRIPT_NO_STOP_CODON
public static final VariantEffect.ErrorWarningType WARNING_TRANSCRIPT_NO_STOP_CODON
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ERROR_CHROMOSOME_NOT_FOUND
public static final VariantEffect.ErrorWarningType ERROR_CHROMOSOME_NOT_FOUND
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ERROR_OUT_OF_CHROMOSOME_RANGE
public static final VariantEffect.ErrorWarningType ERROR_OUT_OF_CHROMOSOME_RANGE
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ERROR_OUT_OF_EXON
public static final VariantEffect.ErrorWarningType ERROR_OUT_OF_EXON
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ERROR_MISSING_CDS_SEQUENCE
public static final VariantEffect.ErrorWarningType ERROR_MISSING_CDS_SEQUENCE
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Method Detail
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values
public static VariantEffect.ErrorWarningType[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (VariantEffect.ErrorWarningType c : VariantEffect.ErrorWarningType.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
public static VariantEffect.ErrorWarningType valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
java.lang.IllegalArgumentException
- if this enum type has no constant with the specified namejava.lang.NullPointerException
- if the argument is null
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isError
public boolean isError()
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isWarning
public boolean isWarning()
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