Class TestCasesAnnParse
- java.lang.Object
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- org.snpeff.snpEffect.testCases.unity.TestCasesAnnParse
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public class TestCasesAnnParse extends java.lang.Object
Test case for parsing ANN fields
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Constructor Summary
Constructors Constructor Description TestCasesAnnParse()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
test_EffectType()
Make sure all effect_tpyes have appropriate impacts, regions, etc.void
test_old_SO()
void
test_old_SO_vcf()
void
testCase_tfbs_ablation()
Make sure there are no exceptions thrown when parsing TFBS_abalation SO term
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Method Detail
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test_EffectType
public void test_EffectType()
Make sure all effect_tpyes have appropriate impacts, regions, etc.
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test_old_SO
public void test_old_SO()
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test_old_SO_vcf
public void test_old_SO_vcf()
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testCase_tfbs_ablation
public void testCase_tfbs_ablation()
Make sure there are no exceptions thrown when parsing TFBS_abalation SO term
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