Package org.broad.igv.bbfile
Class BigWigSection
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- org.broad.igv.bbfile.BigWigSection
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public class BigWigSection extends java.lang.Object
Created by IntelliJ IDEA. User: Owner Date: May 3, 2010 Time: 12:32:17 AM To change this template use File | Settings | File Templates.
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Constructor Summary
Constructors Constructor Description BigWigSection(byte[] sectionBuffer, java.util.HashMap<java.lang.Integer,java.lang.String> chromosomeMap, boolean isLowToHigh, RPTreeLeafNodeItem leafHitItem)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description int
getItemCount()
int
getSectionData(RPChromosomeRegion selectionRegion, boolean contained, java.util.ArrayList<WigItem> wigItemList)
int
getSectionDataSize()
BigWigSectionHeader
getSectionHeader()
boolean
isValidSectionType()
void
print()
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Constructor Detail
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BigWigSection
public BigWigSection(byte[] sectionBuffer, java.util.HashMap<java.lang.Integer,java.lang.String> chromosomeMap, boolean isLowToHigh, RPTreeLeafNodeItem leafHitItem)
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Method Detail
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isValidSectionType
public boolean isValidSectionType()
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getItemCount
public int getItemCount()
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getSectionHeader
public BigWigSectionHeader getSectionHeader()
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getSectionDataSize
public int getSectionDataSize()
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getSectionData
public int getSectionData(RPChromosomeRegion selectionRegion, boolean contained, java.util.ArrayList<WigItem> wigItemList)
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print
public void print()
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