98 constexpr
aa10li() noexcept = default;
111 static constexpr
char_type rank_to_char_table[
alphabet_size]{
'A',
'B',
'C',
'F',
'G',
'H',
'I',
'J',
'K',
'P'};
123 ret[
static_cast<rank_type>(rank_to_char_table[rnk])] = rnk;
169 return char_to_rank_table[
static_cast<index_t
>(chr)];
175 return rank_to_char_table[rank];
194 inline namespace literals
210 constexpr
aa10li operator""_aa10li(
char const c) noexcept
226 inline aa10li_vector operator""_aa10li(
char const *
const s,
size_t const n)
231 for (
size_t i = 0; i < n; ++i)
232 r[i].assign_char(s[i]);
Provides seqan3::aminoacid_alphabet.
Provides seqan3::aminoacid_base.
The reduced Li amino acid alphabet.
Definition: aa10li.hpp:83
constexpr aa10li() noexcept=default
Defaulted.
A CRTP-base that makes defining a custom alphabet easier.
Definition: alphabet_base.hpp:57
constexpr derived_type & assign_char(char_type const chr) noexcept requires(!std
Assign from a character, implicitly converts invalid characters.
Definition: alphabet_base.hpp:163
detail::min_viable_uint_t< size - 1 > rank_type
The type of the alphabet when represented as a number (e.g. via to_rank()).
Definition: alphabet_base.hpp:80
static constexpr detail::min_viable_uint_t< size > alphabet_size
The size of the alphabet, i.e. the number of different values it can take.
Definition: alphabet_base.hpp:199
std::conditional_t< std::same_as< char_t, void >, char, char_t > char_type
The char representation; conditional needed to make semi alphabet definitions legal.
Definition: alphabet_base.hpp:72
A CRTP-base that refines seqan3::alphabet_base and is used by the amino acids.
Definition: aminoacid_base.hpp:32
The main SeqAn3 namespace.
Definition: aligned_sequence_concept.hpp:29
constexpr char_type to_lower(char_type const c) noexcept
Converts 'A'-'Z' to 'a'-'z' respectively; other characters are returned as is.
Definition: transform.hpp:83