Class FilterFileFaker


  • public class FilterFileFaker
    extends FileFaker
    Created by jcarey on 3/13/14. Illumina uses an algorithm described in "Theory of RTA" that determines whether or not a cluster passes filter("PF") or not. These values are written as sequential bytes to Filter Files. The structure of a filter file is as follows: Bytes 0-3 : 0 Bytes 4-7 : unsigned int version Bytes 8-11 : unsigned int numClusters Bytes 12...: boolean encoded in a byte representing whether the cluster passing or failing.