Package picard.fastq

Class BamToBfqWriter


  • @Deprecated
    public class BamToBfqWriter
    extends SamToBfqWriter
    Deprecated.
    Deprecated since July 2020. Use SamToBfqWriter instead
    • Constructor Detail

      • BamToBfqWriter

        public BamToBfqWriter​(File bamFile,
                              File referenceSequence,
                              String outputPrefix,
                              Integer total,
                              Integer chunk,
                              boolean pairedReads,
                              String namePrefix,
                              boolean includeNonPfReads,
                              boolean clipAdapters,
                              Integer basesToWrite)
        Deprecated.
      • BamToBfqWriter

        public BamToBfqWriter​(File bamFile,
                              String outputPrefix,
                              boolean pairedReads,
                              String namePrefix,
                              boolean includeNonPfReads)
        Deprecated.