Package picard.util

Enum BaitDesigner.DesignStrategy

    • Enum Constant Detail

      • CenteredConstrained

        public static final BaitDesigner.DesignStrategy CenteredConstrained
        Implementation that "constrains" baits to be within the target region when possible.
      • FixedOffset

        public static final BaitDesigner.DesignStrategy FixedOffset
        Design that places baits at fixed offsets over targets, allowing them to hang off the ends as dictated by the target size and offset.
      • Simple

        public static final BaitDesigner.DesignStrategy Simple
        Ultra simple bait design algorithm that just lays down baits starting at the target start position until either the bait start runs off the end of the target or the bait would run off the sequence
    • Method Detail

      • values

        public static BaitDesigner.DesignStrategy[] values()
        Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:
        for (BaitDesigner.DesignStrategy c : BaitDesigner.DesignStrategy.values())
            System.out.println(c);
        
        Returns:
        an array containing the constants of this enum type, in the order they are declared
      • valueOf

        public static BaitDesigner.DesignStrategy valueOf​(String name)
        Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
        Parameters:
        name - the name of the enum constant to be returned.
        Returns:
        the enum constant with the specified name
        Throws:
        IllegalArgumentException - if this enum type has no constant with the specified name
        NullPointerException - if the argument is null