petsc-3.9.4 2018-09-11
#
# This is the makefile for compiling PETSc. See
# http://www.mcs.anl.gov/petsc/documentation/installation.html for directions on installing PETSc.
# See also conf for additional commands.
#
ALL: all
LOCDIR = ./
DIRS = src include tutorials interfaces share/petsc/matlab
CFLAGS =
FFLAGS =
CPPFLAGS =
FPPFLAGS =
# next line defines PETSC_DIR and PETSC_ARCH if they are not set
include ././${PETSC_ARCH}/lib/petsc/conf/petscvariables
include ${PETSC_DIR}/lib/petsc/conf/variables
include ${PETSC_DIR}/lib/petsc/conf/rules
include ${PETSC_DIR}/lib/petsc/conf/test
# This makefile contains a lot of PHONY targets with improperly specified prerequisites
# where correct execution instead depends on the targets being processed in the correct
# order. This is gross, but this makefile doesn't really do any work. Sub-makes still
# benefit from parallelism.
.NOTPARALLEL:
#
# Basic targets to build PETSc libraries.
# all: builds the c, fortran, and f90 libraries
all:
+@${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} chk_petscdir chk_upgrade | tee ${PETSC_ARCH}/lib/petsc/conf/make.log
@ln -sf ${PETSC_ARCH}/lib/petsc/conf/make.log make.log
+@if [ "${MAKE_IS_GNUMAKE}" != "" ]; then \
${OMAKE_PRINTDIR} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} all-gnumake-local 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log; \
elif [ "${PETSC_BUILD_USING_CMAKE}" != "" ]; then \
${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} all-cmake-local 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log \
| egrep -v '( --check-build-system |cmake -E | -o CMakeFiles/petsc[[:lower:]]*.dir/| -o lib/libpetsc|CMakeFiles/petsc[[:lower:]]*\.dir/(build|depend|requires)|-f CMakeFiles/Makefile2|Dependee .* is newer than depender |provides\.build. is up to date)'; \
else \
${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} all-legacy-local 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log \
| ${GREP} -v "has no symbols"; \
fi
@egrep -i "( error | error: |no such file or directory)" ${PETSC_ARCH}/lib/petsc/conf/make.log | tee ${PETSC_ARCH}/lib/petsc/conf/error.log > /dev/null
+@if test -s ${PETSC_ARCH}/lib/petsc/conf/error.log; then \
printf ${PETSC_TEXT_HILIGHT}"**************************ERROR*************************************\n" 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log; \
echo " Error during compile, check ${PETSC_ARCH}/lib/petsc/conf/make.log" 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log; \
echo " Send it and ${PETSC_ARCH}/lib/petsc/conf/configure.log to petsc-maint@mcs.anl.gov" 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log;\
printf "********************************************************************"${PETSC_TEXT_NORMAL}"\n" 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log;\
else \
${OMAKE} shared_install PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} 2>&1 | tee -a ${PETSC_ARCH}/lib/petsc/conf/make.log ;\
fi #solaris make likes to print the whole command that gave error. So split this up into the smallest chunk below
@echo "Finishing make run at `date +'%a, %d %b %Y %H:%M:%S %z'`" >> ${PETSC_ARCH}/lib/petsc/conf/make.log
@if test -s ${PETSC_ARCH}/lib/petsc/conf/error.log; then exit 1; fi
all-gnumake:
@if [ "${MAKE_IS_GNUMAKE}" != "" ]; then \
${OMAKE_PRINTDIR} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} PETSC_BUILD_USING_CMAKE="" all;\
else printf ${PETSC_TEXT_HILIGHT}"Build not configured for GNUMAKE. Quiting"${PETSC_TEXT_NORMAL}"\n"; exit 1; fi
all-cmake:
@if [ "${PETSC_BUILD_USING_CMAKE}" != "" ]; then \
${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} MAKE_IS_GNUMAKE="" all;\
else printf ${PETSC_TEXT_HILIGHT}"Build not configured for CMAKE. Quiting"${PETSC_TEXT_NORMAL}"\n"; exit 1; fi
all-legacy:
@${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} PETSC_BUILD_USING_CMAKE="" MAKE_IS_GNUMAKE="" all
all-gnumake-local: info gnumake matlabbin mpi4py-build petsc4py-build libmesh-build slepc-build
all-cmake-local: info cmakegen cmake matlabbin mpi4py-build petsc4py-build
all-legacy-local: chklib_dir info deletelibs deletemods build matlabbin shared_nomesg mpi4py-build petsc4py-build
#
# Prints information about the system and version of PETSc being compiled
#
info:
-@echo "=========================================="
-@echo " "
-@echo "See documentation/faq.html and documentation/bugreporting.html"
-@echo "for help with installation problems. Please send EVERYTHING"
-@echo "printed out below when reporting problems. Please check the"
-@echo "mailing list archives and consider subscribing."
-@echo " "
-@echo " http://www.mcs.anl.gov/petsc/miscellaneous/mailing-lists.html"
-@echo " "
-@echo "=========================================="
-@echo Starting make run on `hostname` at `date +'%a, %d %b %Y %H:%M:%S %z'`
-@echo Machine characteristics: `uname -a`
-@echo "-----------------------------------------"
-@echo "Using PETSc directory: ${PETSC_DIR}"
-@echo "Using PETSc arch: ${PETSC_ARCH}"
-@echo "-----------------------------------------"
-@grep "define PETSC_VERSION" ${PETSC_DIR}/include/petscversion.h | ${SED} "s/........//"
-@echo "-----------------------------------------"
-@echo "Using configure Options: ${CONFIGURE_OPTIONS}"
-@echo "Using configuration flags:"
-@grep "\#define " ${PETSCCONF_H}
-@echo "-----------------------------------------"
-@echo "Using C/C++ compile: ${PETSC_COMPILE}"
-@if [ "${PETSC_LANGUAGE}" = "CONLY" -a "${MPICC_SHOW}" != "" ]; then \
printf "mpicc -show: %b\n" "${MPICC_SHOW}"; \
elif [ "${PETSC_LANGUAGE}" = "CXXONLY" -a "${MPICXX_SHOW}" != "" ]; then \
printf "mpicxx -show: %b\n" "${MPICXX_SHOW}"; \
fi;
-@if [ "${FC}" != "" ]; then \
echo "Using Fortran compile: ${PETSC_FCOMPILE}";\
if [ "${MPIFC_SHOW}" != "" ]; then \
printf "mpif90 -show: %b\n" "${MPIFC_SHOW}"; \
fi; \
fi
-@if [ "${CUDAC}" != "" ]; then \
echo "Using CUDA compile: ${PETSC_CUCOMPILE}";\
fi
-@echo "-----------------------------------------"
-@echo "Using C/C++ linker: ${PCC_LINKER}"
-@echo "Using C/C++ flags: ${PCC_LINKER_FLAGS}"
-@if [ "${FC}" != "" ]; then \
echo "Using Fortran linker: ${FC_LINKER}";\
echo "Using Fortran flags: ${FC_LINKER_FLAGS}";\
fi
-@echo "-----------------------------------------"
-@echo "Using system modules: ${LOADEDMODULES}"
-@TESTDIR=`mktemp -q -d -t petscmpi-XXXXXXXX` && \
echo '#include ' > $${TESTDIR}/mpitest.c && \
BUF=`${CPP} ${PETSC_CCPPFLAGS} $${TESTDIR}/mpitest.c |grep 'mpi\.h' | ( head -1 ; cat > /dev/null )` && \
echo Using mpi.h: $${BUF}; ${RM} -rf $${TESTDIR}
-@echo "-----------------------------------------"
-@echo "Using libraries: ${PETSC_LIB}"
-@echo "------------------------------------------"
-@echo "Using mpiexec: ${MPIEXEC}"
-@echo "------------------------------------------"
-@echo "Using MAKEFLAGS: -j$(MAKE_NP) -l$(MAKE_LOAD) $(MAKEFLAGS)"
-@echo "=========================================="
#
# Builds the PETSc libraries
# This target also builds fortran77 and f90 interface
# files and compiles .F files
#
build:
-@echo "BEGINNING TO COMPILE LIBRARIES IN ALL DIRECTORIES"
-@echo "========================================="
-@${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} ACTION=libfast tree
-@${RANLIB} ${PETSC_LIB_DIR}/*.${AR_LIB_SUFFIX} > tmpf 2>&1 ; ${GREP} -v "has no symbols" tmpf; ${RM} tmpf;
-@echo "Completed building libraries"
-@echo "========================================="
#
# Build MatLab binaries
#
matlabbin:
-@if [ "${MATLAB_MEX}" != "" -a "${MATLAB_SOCKET}" != "" -a "${PETSC_SCALAR}" = "real" -a "${PETSC_PRECISION}" = "double" ]; then \
echo "BEGINNING TO COMPILE MATLAB INTERFACE"; \
if [ ! -d "${PETSC_DIR}/${PETSC_ARCH}/lib/petsc" ] ; then ${MKDIR} ${PETSC_DIR}/${PETSC_ARCH}/lib/petsc; fi; \
if [ ! -d "${PETSC_DIR}/${PETSC_ARCH}/lib/petsc/matlab" ] ; then ${MKDIR} ${PETSC_DIR}/${PETSC_ARCH}/lib/petsc/matlab; fi; \
cd src/sys/classes/viewer/impls/socket/matlab && ${OMAKE} matlabcodes PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR}; \
echo "========================================="; \
fi
#
# Builds PETSc test examples for a given architecture
#
test_install: test
check: test
test:
-+@${OMAKE} PATH="${PETSC_DIR}/${PETSC_ARCH}/lib:${PATH}" PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} test_build 2>&1 | tee ./${PETSC_ARCH}/lib/petsc/conf/test.log
testx:
-@${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} testx_build 2>&1 | tee ./${PETSC_ARCH}/lib/petsc/conf/testx.log
test_build:
-@echo "Running test examples to verify correct installation"
-@echo "Using PETSC_DIR=${PETSC_DIR} and PETSC_ARCH=${PETSC_ARCH}"
+@cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} clean
+@cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} testex19
+@if [ "${HYPRE_LIB}" != "" ] && [ "${PETSC_WITH_BATCH}" = "" ]; then \
cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} DIFF=${PETSC_DIR}/lib/petsc/bin/petscdiff runex19_hypre; \
fi;
+@if [ "${MUMPS_LIB}" != "" ] && [ "${PETSC_WITH_BATCH}" = "" ]; then \
cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} DIFF=${PETSC_DIR}/lib/petsc/bin/petscdiff runex19_fieldsplit_mumps; \
fi;
+@if [ "${SUPERLU_DIST_LIB}" != "" ] && [ "${PETSC_WITH_BATCH}" = "" ]; then \
cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} DIFF=${PETSC_DIR}/lib/petsc/bin/petscdiff runex19_superlu_dist; \
fi;
+@if ( [ "${ML_LIB}" != "" ] || [ "${TRILINOS_LIB}" != "" ] ) && [ "${PETSC_WITH_BATCH}" = "" ]; then \
cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} DIFF=${PETSC_DIR}/lib/petsc/bin/petscdiff runex19_ml; \
fi;
+@cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} ex19.rm
+@if [ "${PETSC4PY}" = "yes" ]; then \
cd src/ksp/ksp/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} testex100; \
fi;
+@egrep "^#define PETSC_HAVE_FORTRAN 1" ${PETSCCONF_H} | tee .ftn.log > /dev/null; \
if test -s .ftn.log; then \
cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} testex5f; \
fi; ${RM} .ftn.log;
+@cd src/snes/examples/tutorials >/dev/null; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} clean
-@echo "Completed test examples"
testx_build:
-@echo "Running graphics test example to verify correct X11 installation"
-@echo "Using PETSC_DIR=${PETSC_DIR} and PETSC_ARCH=${PETSC_ARCH}"
@cd src/snes/examples/tutorials; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} clean
@cd src/snes/examples/tutorials; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} testxex19
@cd src/snes/examples/tutorials; ${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} clean
-@echo "Completed graphics test example"
# Ranlib on the libraries
ranlib:
${RANLIB} ${PETSC_LIB_DIR}/*.${AR_LIB_SUFFIX}
# Deletes PETSc libraries
deletelibs:
-${RM} -rf ${PETSC_LIB_DIR}/libpetsc*.*
deletemods:
-${RM} -f ${PETSC_DIR}/${PETSC_ARCH}/include/petsc*.mod
# Cleans up build
allclean-legacy: deletelibs deletemods
-@${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} ACTION=clean-legacy tree
allclean-cmake:
-@cd ${PETSC_ARCH} && ${OMAKE} clean
allclean-gnumake:
-@${OMAKE} -f gmakefile clean
allclean:
@if [ "${MAKE_IS_GNUMAKE}" != "" ]; then \
${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} allclean-gnumake; \
elif [ "${PETSC_BUILD_USING_CMAKE}" != "" ]; then \
${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} allclean-cmake; \
else \
${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} allclean-legacy; \
fi
clean:: allclean
distclean: chk_petscdir
@if [ -f ${PETSC_DIR}/${PETSC_ARCH}/lib/petsc/conf/reconfigure-${PETSC_ARCH}.py ]; then \
echo "*** Preserving ${PETSC_DIR}/${PETSC_ARCH}/lib/petsc/conf/reconfigure-${PETSC_ARCH}.py in ${PETSC_DIR} ***"; \
mv -f ${PETSC_DIR}/${PETSC_ARCH}/lib/petsc/conf/reconfigure-${PETSC_ARCH}.py ${PETSC_DIR}/; fi
@echo "*** Deleting all build files in ${PETSC_DIR}/${PETSC_ARCH} ***"
-${RM} -rf ${PETSC_DIR}/${PETSC_ARCH}/
#
reconfigure:
@${PYTHON} ${PETSC_ARCH}/lib/petsc/conf/reconfigure-${PETSC_ARCH}.py
#
install:
@${PYTHON} ./config/install.py -destDir=${DESTDIR}
+${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} mpi4py-install petsc4py-install libmesh-install slepc-install
newall:
-@cd src/sys; @${PYTHON} ${PETSC_DIR}/config/builder.py
-@cd src/vec; @${PYTHON} ${PETSC_DIR}/config/builder.py
-@cd src/mat; @${PYTHON} ${PETSC_DIR}/config/builder.py
-@cd src/dm; @${PYTHON} ${PETSC_DIR}/config/builder.py
-@cd src/ksp; @${PYTHON} ${PETSC_DIR}/config/builder.py
-@cd src/snes; @${PYTHON} ${PETSC_DIR}/config/builder.py
-@cd src/ts; @${PYTHON} ${PETSC_DIR}/config/builder.py
streams:
-@echo "running streams in src/benchmarks/streams"
+@cd src/benchmarks/streams; ${OMAKE} PATH="${PETSC_DIR}/${PETSC_ARCH}/lib:${PATH}" PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} streams
stream:
-@echo "running stream in src/benchmarks/streams"
+@cd src/benchmarks/streams; ${OMAKE} PATH="${PETSC_DIR}/${PETSC_ARCH}/lib:${PATH}" PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} stream
# ------------------------------------------------------------------
#
# All remaining actions are intended for PETSc developers only.
# PETSc users should not generally need to use these commands.
#
# See the users manual for how the tags files may be used from Emacs and Vi/Vim
#
alletags:
-@${PYTHON} lib/petsc/bin/maint/generateetags.py
-@find config -type f -name "*.py" |grep -v SCCS | xargs etags -o TAGS_PYTHON
# obtain gtags from http://www.gnu.org/s/global/
allgtags:
-@find ${PETSC_DIR}/include ${PETSC_DIR}/src ${PETSC_DIR}/bin -regex '\(.*makefile\|.*\.\(cc\|hh\|cpp\|C\|hpp\|c\|h\|cu\|m\)$$\)' | grep -v ftn-auto | gtags -f -
allfortranstubs:
-@${RM} -rf ${PETSC_ARCH}/include/petsc/finclude/ftn-auto/*-tmpdir
@${PYTHON} lib/petsc/bin/maint/generatefortranstubs.py ${BFORT} ${VERBOSE}
-@${PYTHON} lib/petsc/bin/maint/generatefortranstubs.py -merge ${VERBOSE}
-@${RM} -rf ${PETSC_ARCH}/include/petsc/finclude/ftn-auto/*-tmpdir
deletefortranstubs:
-@find . -type d -name ftn-auto | xargs rm -rf
cmakegen:
-@${PYTHON} config/cmakegen.py
#
# These are here for the target allci and allco, and etags
#
BMAKEFILES = conf/variables conf/rules conf/test
SCRIPTS = lib/petsc/bin/maint/builddist lib/petsc/bin/maint/wwwman lib/petsc/bin/maint/xclude lib/petsc/bin/maint/bugReport.py lib/petsc/bin/maint/buildconfigtest lib/petsc/bin/maint/builddistlite \
lib/petsc/bin/maint/buildtest lib/petsc/bin/maint/checkBuilds.py lib/petsc/bin/maint/copylognightly lib/petsc/bin/maint/copylognightly.tao lib/petsc/bin/maint/countfiles lib/petsc/bin/maint/findbadfiles \
lib/petsc/bin/maint/fixinclude lib/petsc/bin/maint/getexlist lib/petsc/bin/maint/getpdflabels.py lib/petsc/bin/maint/helpindex.py lib/petsc/bin/maint/hosts.local lib/petsc/bin/maint/hosts.solaris \
lib/petsc/bin/maint/lex.py lib/petsc/bin/maint/mapnameslatex.py lib/petsc/bin/maint/startnightly lib/petsc/bin/maint/startnightly.tao lib/petsc/bin/maint/submitPatch.py \
lib/petsc/bin/maint/update-docs.py lib/petsc/bin/maint/wwwindex.py lib/petsc/bin/maint/xcludebackup lib/petsc/bin/maint/xcludecblas lib/petsc/bin/maint/zap lib/petsc/bin/maint/zapall \
config/PETSc/Configure.py config/PETSc/Options.py \
config/PETSc/utilities/*.py
# Builds all the documentation - should be done every night
alldoc: allcite allpdf alldoc1 alldoc2 docsetdate
# Build just citations
allcite: chk_loc deletemanualpages
-${PYTHON} lib/petsc/bin/maint/countpetsccits.py
-${OMAKE} ACTION=manualpages_buildcite tree_basic LOC=${LOC}
-@sed -e s%man+../%man+manualpages/% ${LOC}/docs/manualpages/manualpages.cit > ${LOC}/docs/manualpages/htmlmap
-@cat ${PETSC_DIR}/src/docs/mpi.www.index >> ${LOC}/docs/manualpages/htmlmap
# Build just PDF manuals + prerequisites
allpdf: chk_loc allcite
-cd src/docs/tex/manual; ${OMAKE} manual.pdf LOC=${LOC}
-cd src/docs/tex/manual; ${OMAKE} developers.pdf LOC=${LOC}
-cd src/docs/tao_tex/manual; ${OMAKE} manual.pdf LOC=${LOC}
# Build just manual pages + prerequisites
allmanpages: chk_loc allcite
-${OMAKE} ACTION=manualpages tree_basic LOC=${LOC}
# Build just manual examples + prerequisites
allmanexamples: chk_loc allmanpages
-${OMAKE} ACTION=manexamples tree_basic LOC=${LOC}
# Build everything that goes into 'doc' dir except html sources
alldoc1: chk_loc chk_concepts_dir allcite allmanpages allmanexamples
-${OMAKE} manimplementations LOC=${LOC}
-${PYTHON} lib/petsc/bin/maint/wwwindex.py ${PETSC_DIR} ${LOC}
-${OMAKE} manconcepts LOC=${LOC}
-${OMAKE} ACTION=getexlist tree_basic LOC=${LOC}
-${OMAKE} ACTION=exampleconcepts tree_basic LOC=${LOC}
-${PYTHON} lib/petsc/bin/maint/helpindex.py ${PETSC_DIR} ${LOC}
# Builds .html versions of the source
# html overwrites some stuff created by update-docs - hence this is done later.
alldoc2: chk_loc
-${OMAKE} ACTION=html PETSC_DIR=${PETSC_DIR} alltree LOC=${LOC}
-${PYTHON} lib/petsc/bin/maint/update-docs.py ${PETSC_DIR} ${LOC}
#
# Makes links for all manual pages in $LOC/docs/manualpages/all
allman:
@cd ${LOC}/docs/manualpages; rm -rf all ; mkdir all ; find * -type d -wholename all -prune -o -name index.html -prune -o -type f -name \*.html -exec ln -s -f ../{} all \;
DOCSETDATE_PRUNE_LIST=-o -type f -wholename share/petsc/saws/linearsolveroptions.html -prune -o -type f -wholename tutorials/HandsOnExercise.html -prune -o -type f -wholename tutorials/TAOHandsOnExercise.html -prune
# modify all generated html files and add in version number, date, canonical URL info.
docsetdate: chk_petscdir
@echo "Updating generated html files with petsc version, date, canonical URL info";\
version_release=`grep '^#define PETSC_VERSION_RELEASE ' include/petscversion.h |tr -s ' ' | cut -d ' ' -f 3`; \
version_major=`grep '^#define PETSC_VERSION_MAJOR ' include/petscversion.h |tr -s ' ' | cut -d ' ' -f 3`; \
version_minor=`grep '^#define PETSC_VERSION_MINOR ' include/petscversion.h |tr -s ' ' | cut -d ' ' -f 3`; \
version_subminor=`grep '^#define PETSC_VERSION_SUBMINOR ' include/petscversion.h |tr -s ' ' | cut -d ' ' -f 3`; \
if [ $${version_release} = 0 ]; then \
petscversion=petsc-master; \
export petscversion; \
elif [ $${version_release} = 1 ]; then \
petscversion=petsc-$${version_major}.$${version_minor}.$${version_subminor}; \
export petscversion; \
else \
echo "Unknown PETSC_VERSION_RELEASE: $${version_release}"; \
exit; \
fi; \
datestr=`git log -1 --pretty=format:%ci | cut -d ' ' -f 1`; \
export datestr; \
gitver=`git describe --match "v*"`; \
export gitver; \
find * -type d -wholename src/docs/website -prune -o -type d -wholename src/benchmarks/results -prune -o \
-type d -wholename config/BuildSystem/docs/website -prune -o -type d -wholename include/web -prune -o \
-type d -wholename 'arch-*' -prune -o -type d -wholename src/tops -prune -o -type d -wholename externalpackages -prune ${DOCSETDATE_PRUNE_LIST} -o \
-type f -name \*.html \
-exec perl -pi -e 's^(<body.*>)^$$1\n <div id=\"version\" align=right><b>$$ENV{petscversion} $$ENV{datestr}</b></div>\n <div id="bugreport" align=right><a href="mailto:petsc-maint\@mcs.anl.gov?subject=Typo or Error in Documentation &body=Please describe the typo or error in the documentation: $$ENV{petscversion} $$ENV{gitver} {} "><small>Report Typos and Errors</small></a></div>^i' {} \; \
-exec perl -pi -e 's^(<head>)^$$1 <link rel="canonical" href="http://www.mcs.anl.gov/petsc/petsc-current/{}" />^i' {} \; ; \
echo "Done fixing version number, date, canonical URL info"
alldocclean: deletemanualpages allcleanhtml
# Deletes man pages (HTML version)
deletemanualpages: chk_loc
-@if [ -d ${LOC} -a -d ${LOC}/docs/manualpages ]; then \
find ${LOC}/docs/manualpages -type f -name "*.html" -exec ${RM} {} \; ;\
${RM} ${LOC}/docs/exampleconcepts ;\
${RM} ${LOC}/docs/manconcepts ;\
${RM} ${LOC}/docs/manualpages/manualpages.cit ;\
${PYTHON} lib/petsc/bin/maint/update-docs.py ${PETSC_DIR} ${LOC} clean;\
fi
allcleanhtml:
-${OMAKE} ACTION=cleanhtml PETSC_DIR=${PETSC_DIR} alltree
chk_concepts_dir: chk_loc
@if [ ! -d "${LOC}/docs/manualpages/concepts" ]; then \
echo Making directory ${LOC}/docs/manualpages/concepts for library; ${MKDIR} ${LOC}/docs/manualpages/concepts; fi
###########################################################
# targets to build distribution and update docs
###########################################################
# Creates ${HOME}/petsc.tar.gz [and petsc-lite.tar.gz]
dist:
${PETSC_DIR}/lib/petsc/bin/maint/builddist ${PETSC_DIR} master
# This target works only if you can do 'ssh petsc@login.mcs.anl.gov'
# also copy the file over to ftp site.
web-snapshot:
@if [ ! -f "${HOME}/petsc-master.tar.gz" ]; then \
echo "~/petsc-master.tar.gz missing! cannot update petsc-master snapshot on mcs-web-site"; \
else \
echo "updating petsc-master snapshot on mcs-web-site"; \
tmpdir=`mktemp -d -t petsc-doc.XXXXXXXX`; \
cd $${tmpdir}; tar -xzf ${HOME}/petsc-master.tar.gz; \
/usr/bin/rsync -e ssh -az --delete $${tmpdir}/petsc-master/ \
petsc@login.mcs.anl.gov:/mcs/web/research/projects/petsc/petsc-master ;\
/bin/cp -f /home/petsc/petsc-master.tar.gz /mcs/ftp/pub/petsc/petsc-master.tar.gz;\
${RM} -rf $${tmpdir} ;\
fi
# build the tarfile - and then update petsc-master snapshot on mcs-web-site
update-web-snapshot: dist web-snapshot
# This target updates website main pages
update-web:
@cd ${PETSC_DIR}/src/docs; make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} bib2html; \
/usr/bin/rsync -az -C --exclude=documentation/index.html \
--exclude=documentation/installation.html --exclude=download/index.html \
${PETSC_DIR}/src/docs/website/ petsc@login.mcs.anl.gov:/mcs/web/research/projects/petsc
@cd ${PETSC_DIR}/docs; /usr/bin/rsync -az developers.pdf petsc@login.mcs.anl.gov:/mcs/web/research/projects/petsc/developers/
@cd ${PETSC_DIR}/src/docs/tex; /usr/bin/rsync -az petscapp.bib petsc.bib petsc@login.mcs.anl.gov:/mcs/web/research/projects/petsc/publications
#
# builds a single list of files for each PETSc library so they may all be built in parallel
# without a recursive set of make calls
createfastbuild:
cd src/vec; ${RM} -f files; /bin/echo -n "SOURCEC = " > files; make tree ACTION=sourcelist BASE_DIR=${PETSC_DIR}/src/vec
###########################################################
#
# See script for details
#
gcov:
-@$(PYTHON) ${PETSC_DIR}/lib/petsc/bin/maint/gcov.py -run_gcov
mergegcov:
-@$(PYTHON) ${PETSC_DIR}/lib/petsc/bin/maint/gcov.py -merge_gcov ${LOC} *.tar.gz
########################
#
# Create the include dependency graph (requires graphviz to be available)
#
includegraph:
-@${PETSC_DIR}/src/contrib/style/include-graph.sh includegraph.pdf
-@echo Include dependency graph written to includegraph.pdf
#
# -------------------------------------------------------------------------------
#
# Some macros to check if the fortran interface is up-to-date.
#
countfortranfunctions:
-@cd ${PETSC_DIR}/src/fortran; egrep '^void' custom/*.c auto/*.c | \
cut -d'(' -f1 | tr -s ' ' | cut -d' ' -f2 | uniq | egrep -v "(^$$|Petsc)" | \
sed "s/_$$//" | sort > /tmp/countfortranfunctions
countcfunctions:
-@grep PETSC_EXTERN ${PETSC_DIR}/include/*.h | grep "(" | tr -s ' ' | \
cut -d'(' -f1 | cut -d' ' -f3 | grep -v "\*" | tr -s '\012' | \
tr 'A-Z' 'a-z' | sort | uniq > /tmp/countcfunctions
difffortranfunctions: countfortranfunctions countcfunctions
-@echo -------------- Functions missing in the fortran interface ---------------------
-@${DIFF} /tmp/countcfunctions /tmp/countfortranfunctions | grep "^<" | cut -d' ' -f2
-@echo ----------------- Functions missing in the C interface ------------------------
-@${DIFF} /tmp/countcfunctions /tmp/countfortranfunctions | grep "^>" | cut -d' ' -f2
-@${RM} /tmp/countcfunctions /tmp/countfortranfunctions
checkbadfortranstubs:
-@echo "========================================="
-@echo "Functions with MPI_Comm as an Argument"
-@echo "========================================="
-@cd ${PETSC_DIR}/src/fortran/auto; grep '^void' *.c | grep 'MPI_Comm' | \
tr -s ' ' | tr -s ':' ' ' |cut -d'(' -f1 | cut -d' ' -f1,3
-@echo "========================================="
-@echo "Functions with a String as an Argument"
-@echo "========================================="
-@cd ${PETSC_DIR}/src/fortran/auto; grep '^void' *.c | grep 'char \*' | \
tr -s ' ' | tr -s ':' ' ' |cut -d'(' -f1 | cut -d' ' -f1,3
-@echo "========================================="
-@echo "Functions with Pointers to PETSc Objects as Argument"
-@echo "========================================="
-@cd ${PETSC_DIR}/src/fortran/auto; \
_p_OBJ=`grep _p_ ${PETSC_DIR}/include/*.h | tr -s ' ' | \
cut -d' ' -f 3 | tr -s '\012' | grep -v '{' | cut -d'*' -f1 | \
sed "s/_p_//g" | tr -s '\012 ' ' *|' ` ; \
for OBJ in $$_p_OBJ; do \
grep "$$OBJ \*" *.c | tr -s ' ' | tr -s ':' ' ' | \
cut -d'(' -f1 | cut -d' ' -f1,3; \
done
checkpackagetests:
-@echo "Missing package tests"
-@cat config/examples/*.py > configexamples; pushd config/BuildSystem/config/packages/; packages=`ls *.py | sed "s/\\.py//g"`;popd; for i in $${packages}; do j=`echo $${i} | tr '[:upper:]' '[:lower:]'`; printf $${j} ; egrep "(with-$${j}|download-$${j})" configexamples | grep -v "=0" | wc -l ; done
-@echo "Missing download package tests"
-@cat config/examples/*.py > configexamples; pushd config/BuildSystem/config/packages/; packages=`grep -l "download " *.py | sed "s/\\.py//g"`;popd; for i in $${packages}; do j=`echo $${i} | tr '[:upper:]' '[:lower:]'`; printf $${j} ; egrep "(download-$${j})" configexamples | grep -v "=0" | wc -l ; done
#
# Automatically generates PETSc exercises in html from the tutorial examples.
#
# The introduction for each section is obtained from docs/manualpages-cite/header_${MANSEC} may be edited
# (used also in introductions to the manual pages)
#
# DO NOT EDIT the *.htm files generated since they will be automatically replaced.
#
# Eventually the line below will replace the two cd in the rule below, it is just this way now for speed
# -@${OMAKE} PETSC_DIR=${PETSC_DIR} pagemaker
#
exercises:
-@echo "========================================="
-@echo "Generating HTML tutorial exercises"
-@${RM} docs/pageform.txt
-@echo "title=\"PETSc Exercises\"" > docs/pageform.txt
-@echo "access_title=Exercise Sections" >> docs/pageform.txt
-@echo "access_format=short" >> docs/pageform.txt
-@echo "startpage=../exercises/introduction.htm" >> docs/pageform.txt
-@echo "NONE title=\"Introduction\" command=link src=../exercises/introduction.htm" >> docs/pageform.txt
-@echo "Generating HTML for individual directories"
-@echo "========================================="
-@${OMAKE} PETSC_DIR=${PETSC_DIR} ACTION=pagemaker tree
-@echo "Completed HTML for individual directories"
-@echo "NONE title=\"<HR>\" " >> docs/pageform.txt;
-@echo "NONE title=\"PETSc Documentation\" command=link src=../index.html target=replace" >> docs/pageform.txt
/home/MPI/class/mpiexmpl/maint/makepage.new -pageform=docs/pageform.txt -access_extra=/dev/null -outdir=docs/exercises
-@echo "========================================="
.PHONY: info info_h all build ranlib deletelibs allclean update \
alletags etags etags_complete etags_noexamples etags_makefiles etags_examples etags_fexamples alldoc allmanualpages \
allhtml allcleanhtml allci allco allrcslabel countfortranfunctions \
start_configure configure_petsc configure_clean matlabbin install
petscao : petscmat petscao.f90.h
petscdm : petscksp petscdm.f90.h
petscdraw : petsc petscdraw.f90.h
petscis : petsc petscis.f90.h
petscksp : petscpc petscksp.f90.h
petsclog : petsc petsclog.f90.h
petscmat : petscvec petscmat.f90.h
petscmg : petscksp petscmg.f90.h
petscpc : petscmat petscpc.f90.h
petscsnes : petscksp petscsnes.f90.h
petscsys : petsc petscsys.f90.h
petscts : petscsnes petscts.f90.h
petsc : petsc.f90.h
petscvec : petscis petscvec.f90.h
petscviewer : petsc petscviewer.f90.h
petscmesh : petsc petscmesh.f90.h
modules : petscao petscdm petscdraw petscis petscksp petsclog petscmat petscmg petscpc petscsnes petscsys petscts petsc petscvec petscviewer petscmesh