Class ObjectiveBlurFlexophoreHardMatchUncovered

  • All Implemented Interfaces:
    IObjectiveCompleteGraph<IMolDistHist>

    public class ObjectiveBlurFlexophoreHardMatchUncovered
    extends java.lang.Object
    implements IObjectiveCompleteGraph<IMolDistHist>
    ObjectiveBlurFlexophoreHardMatchUncovered The weighting of the coverage is hard. Which means that uncovered nodes strongly change the final similarity score. look in getScoreUncoveredNearestNodesBase(SolutionCompleteGraph solution) and getScoreUncoveredNearestNodesQuery(SolutionCompleteGraph solution). Use is subject to license terms.

    Author:
    Modest von Korff Oct 2, 2012 MvK: Start implementation Mar 3. 2016 MvK: updates. Lowered thresh for histogram similarity. Mar 31. 2020 MvK: fraction of carbon is considered in pharmacophore node similarity.
    • Constructor Detail

      • ObjectiveBlurFlexophoreHardMatchUncovered

        public ObjectiveBlurFlexophoreHardMatchUncovered()
      • ObjectiveBlurFlexophoreHardMatchUncovered

        public ObjectiveBlurFlexophoreHardMatchUncovered​(int versionInteractionTable,
                                                         int modePPNodeSimilarity,
                                                         double threshSimilarityNodeHardMatch,
                                                         double threshHistogramSimilarity)