Class InteractionTerm

  • All Implemented Interfaces:
    PotentialEnergyTerm

    public class InteractionTerm
    extends java.lang.Object
    implements PotentialEnergyTerm
    ProteinLigandTerm is used to represent the energy between 2 atoms. The function can be divider into 3 parts: - Linear part for the very short distances <1A (to avoid extreme derivates) - Statistics derived potential when the data is enough to have a dependable function - Lennard-Jones 8-4 VDW when stats are not available