Uses of Class
com.actelion.research.chem.alignment3d.transformation.TransformationSequence
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Uses of TransformationSequence in com.actelion.research.chem.alignment3d
Methods in com.actelion.research.chem.alignment3d that return TransformationSequence Modifier and Type Method Description TransformationSequence
PheSAAlignmentOptimizer.AlignmentResult. getTransform()
Constructors in com.actelion.research.chem.alignment3d with parameters of type TransformationSequence Constructor Description AlignmentResult(double similarity, TransformationSequence transformation, int refConformerIndex, int conformerIndex)
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Uses of TransformationSequence in com.actelion.research.chem.alignment3d.transformation
Methods in com.actelion.research.chem.alignment3d.transformation that return TransformationSequence Modifier and Type Method Description static TransformationSequence
TransformationSequence. decode(java.lang.String s)
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Uses of TransformationSequence in com.actelion.research.chem.docking.receptorpharmacophore
Methods in com.actelion.research.chem.docking.receptorpharmacophore with parameters of type TransformationSequence Modifier and Type Method Description static ShapeVolume
NegativeReceptorImageCreator. create(StereoMolecule lig, StereoMolecule rec, TransformationSequence transformation)
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Uses of TransformationSequence in com.actelion.research.chem.phesa
Methods in com.actelion.research.chem.phesa with parameters of type TransformationSequence Modifier and Type Method Description double[]
PheSAAlignment. findAlignment(double[][] initialTransforms, TransformationSequence optimizedTransform)
double[]
PheSAAlignment. findAlignment(double[][] initialTransforms, TransformationSequence optimizedTransform, boolean optimize)
double[]
PheSAAlignment. findAlignment(double[][] initialTransforms, TransformationSequence optimizedTransform, boolean optimize, boolean tversky)
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Uses of TransformationSequence in com.actelion.research.chem.phesa.pharmacophore
Methods in com.actelion.research.chem.phesa.pharmacophore with parameters of type TransformationSequence Modifier and Type Method Description double
PPTriangle. getMatchingTransform(PPTriangle fitTriangle, TransformationSequence transform, boolean useDirectionality)
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