Constant Field Values

Contents

com.actelion.*

  • com.actelion.research.calc.classification.ClassificationAttr 
    Modifier and Type Constant Field Value
    public static final java.lang.String NEG "negative"
    public static final java.lang.String NO "none"
    public static final java.lang.String POS "positive"
    public static final java.lang.String TAG_TEST_CLASS "TestClassPosNeg"
  • com.actelion.research.calc.classification.PrecisionAndRecall 
    Modifier and Type Constant Field Value
    public static final java.lang.String ATTR_FN "FN"
    public static final java.lang.String ATTR_FP "FP"
    public static final java.lang.String ATTR_TN "TN"
    public static final java.lang.String ATTR_TP "TP"
  • com.actelion.research.calc.regression.gaussianprocess.ParameterGaussianProcess 
    Modifier and Type Constant Field Value
    public static final double LAMBDA 0.005
    public static final java.lang.String TAG_LAMBDA "Lambda"
  • com.actelion.research.calc.regression.knn.KNNRegression 
    Modifier and Type Constant Field Value
    public static final int NEIGHBOURS 3
  • com.actelion.research.calc.regression.knn.ParameterKNN 
    Modifier and Type Constant Field Value
    public static final java.lang.String TAG_NEIGHBOURS "Neighbours"
  • com.actelion.research.calc.regression.linear.pls.ParameterPLS 
    Modifier and Type Constant Field Value
    public static final boolean CENTER_DATA true
    public static final int FACTORS 3
    public static final java.lang.String TAG_FACTORS "Factors"
  • com.actelion.research.calc.regression.linear.pls.PLSRegressionModelCalculator 
    Modifier and Type Constant Field Value
    public static final int FACTORS 15
  • com.actelion.research.calc.regression.linear.pls.boxcox.ParameterPLSBoxCox 
    Modifier and Type Constant Field Value
    public static final double LAMBDA 0.4
    public static final java.lang.String TAG_LAMBDA "Lambda"
  • com.actelion.research.calc.regression.linear.pls.boxcox.PLSBoxCoxY 
    Modifier and Type Constant Field Value
    public static final int FACTORS 15
    public static final double LAMBDA 0.6
  • com.actelion.research.calc.statistics.StatisticsOverview 
    Modifier and Type Constant Field Value
    public static final java.lang.String TAG_MEAN "Avr"
    public static final java.lang.String TAG_MEDIAN "Median"
    public static final java.lang.String TAG_PERCENTILE05 "Percentile.05"
    public static final java.lang.String TAG_PERCENTILE95 "Percentile.95"
    public static final java.lang.String TAG_SDV "SDV"
  • com.actelion.research.chem.alignment3d.transformation.ExponentialMap 
    Modifier and Type Constant Field Value
    public static final double CUTOFF_ANGLE 3.141592653589793
    public static final double EPSILON 1.0E-6
  • com.actelion.research.chem.alignment3d.transformation.Transformation 
    Modifier and Type Constant Field Value
    public static final java.lang.String DELIMITER " "
    public static final java.lang.String ROTATION "r"
    public static final java.lang.String SCALING "s"
    public static final java.lang.String TRANSLATION "t"
  • com.actelion.research.chem.alignment3d.transformation.TransformationSequence 
    Modifier and Type Constant Field Value
    public static final char DELIMITER_END 125
    public static final char DELIMITER_START 123
  • com.actelion.research.chem.descriptor.flexophore.example.MatchFlexophoreNodesMain 
    Modifier and Type Constant Field Value
    public static final java.lang.String IDCODE_100 "ffchb@DXXJWb`dLbbRbrrTTRRMNRUGL@QSPPQQ@@@"
    public static final java.lang.String IDCODE_101 "fi{iA@IJcdn`Xa@cHhhdmDeDdmDjfBM[MXHHZj`bJp@@@"
  • com.actelion.research.chem.docking.scoring.plp.REPTerm 
    Modifier and Type Constant Field Value
    public static final double A 3.2
    public static final double B 5.0
    public static final double B_sq 25.0
    public static final double C 0.05
    public static final double D 20.0
  • com.actelion.research.chem.forcefield.AbstractForceField 
    Modifier and Type Constant Field Value
    public static final double EPS 3.0E-8
    public static final double FUNCTOL 1.0E-4
    public static final double MAXSTEP 100.0
    public static final double MOVETOL 1.0E-7
    public static final double TOLX 1.2E-7
  • com.actelion.research.chem.forcefield.mmff.Constants 
    Modifier and Type Constant Field Value
    public static final double DEG2RAD 0.017453292519943295
    public static final double MDYNE_A_TO_KCAL_MOL 143.9325
    public static final double RAD2DEG 57.29577951308232
  • com.actelion.research.chem.forcefield.mmff.ForceFieldMMFF94 
    Modifier and Type Constant Field Value
    public static final java.lang.String MMFF94 "MMFF94"
    public static final java.lang.String MMFF94S "MMFF94s"
    public static final java.lang.String MMFF94SPLUS "MMFF94s+"
  • com.actelion.research.chem.forcefield.mmff.table.VanDerWaals 
    Modifier and Type Constant Field Value
    public final double b 0.2
    public final double beta 12.0
    public final double daeps 0.5
    public final double darad 0.8
    public final double power 0.25
  • com.actelion.research.chem.io.pdb.parser.PDBFileParser 
    Modifier and Type Constant Field Value
    public static final java.lang.String DATE_FORMAT "dd-MMM-yy"
    public static final java.lang.String TAG_ANISOU "ANISOU"
    public static final java.lang.String TAG_ATOM "ATOM"
    public static final java.lang.String TAG_AUTHOR "AUTHOR"
    public static final java.lang.String TAG_CAVEAT "CAVEAT"
    public static final java.lang.String TAG_CISPEP "CISPEP"
    public static final java.lang.String TAG_COMPND "COMPND"
    public static final java.lang.String TAG_CONECT "CONECT"
    public static final java.lang.String TAG_CRYST1 "CRYST1"
    public static final java.lang.String TAG_DBREF "DBREF"
    public static final java.lang.String TAG_DBREF1_DBREF2 "DBREF1/DBREF2"
    public static final java.lang.String TAG_END "END"
    public static final java.lang.String TAG_ENDMDL "ENDMDL"
    public static final java.lang.String TAG_EXPDTA "EXPDTA"
    public static final java.lang.String TAG_FORMUL "FORMUL"
    public static final java.lang.String TAG_HEADER "HEADER"
    public static final java.lang.String TAG_HELIX "HELIX"
    public static final java.lang.String TAG_HET "HET"
    public static final java.lang.String TAG_HETATM "HETATM"
    public static final java.lang.String TAG_HETNAM "HETNAM"
    public static final java.lang.String TAG_HETSYN "HETSYN"
    public static final java.lang.String TAG_JRNL "JRNL"
    public static final java.lang.String TAG_KEYWDS "KEYWDS"
    public static final java.lang.String TAG_LINK "LINK"
    public static final java.lang.String TAG_MASTER "MASTER"
    public static final java.lang.String TAG_MDLTYP "MDLTYP"
    public static final java.lang.String TAG_MODEL "MODEL"
    public static final java.lang.String TAG_MODRES "MODRES"
    public static final java.lang.String TAG_MTRIX1 "MTRIX1"
    public static final java.lang.String TAG_MTRIX2 "MTRIX2"
    public static final java.lang.String TAG_MTRIX3 "MTRIX3"
    public static final java.lang.String TAG_NUMMDL "NUMMDL"
    public static final java.lang.String TAG_OBSOLTE "OBSLTE"
    public static final java.lang.String TAG_ORIGX1 "ORIGX1"
    public static final java.lang.String TAG_ORIGX2 "ORIGX2"
    public static final java.lang.String TAG_ORIGX3 "ORIGX3"
    public static final java.lang.String TAG_REMARK "REMARK"
    public static final java.lang.String TAG_REMARK_N "REMARK N"
    public static final java.lang.String TAG_REMARK0 "REMARK 0"
    public static final java.lang.String TAG_REMARK1 "REMARK 1"
    public static final java.lang.String TAG_REMARK2 "REMARK 2"
    public static final java.lang.String TAG_REMARK3 "REMARK 3"
    public static final java.lang.String TAG_REVDAT "REVDAT"
    public static final java.lang.String TAG_SCALE1 "SCALE1"
    public static final java.lang.String TAG_SCALE2 "SCALE2"
    public static final java.lang.String TAG_SCALE3 "SCALE3"
    public static final java.lang.String TAG_SEQADV "SEQADV"
    public static final java.lang.String TAG_SEQRES "SEQRES"
    public static final java.lang.String TAG_SHEET "SHEET"
    public static final java.lang.String TAG_SITE "SITE"
    public static final java.lang.String TAG_SOURCE "SOURCE"
    public static final java.lang.String TAG_SPLIT "SPLIT"
    public static final java.lang.String TAG_SPRSDE "SPRSDE"
    public static final java.lang.String TAG_SSBOND "SSBOND"
    public static final java.lang.String TAG_TER "TER"
    public static final java.lang.String TAG_TITLE "TITLE"
  • com.actelion.research.chem.io.pdb.parser.StructureAssembler 
    Modifier and Type Constant Field Value
    public static final java.lang.String LIGAND_GROUP "ligand"
    public static final java.lang.String PROTEIN_GROUP "protein"
    public static final java.lang.String SOLVENT_GROUP "water"
  • com.actelion.research.chem.phesa.DescriptorHandlerShape 
    Modifier and Type Constant Field Value
    public static final int SIZE_CUTOFF 200
  • com.actelion.research.chem.phesa.Gaussian3D 
    Modifier and Type Constant Field Value
    public static final double DIST_CUTOFF 10.0
  • com.actelion.research.chem.phesa.MolecularVolume 
    Modifier and Type Constant Field Value
    public static final double alpha_pref 2.41798793102
    public static final double p 2.82842712475
  • com.actelion.research.chem.phesa.PheSAAlignment 
    Modifier and Type Constant Field Value
    public static final double TVERSKY_COEFFICIENT 0.95
  • com.actelion.research.chem.phesa.VolumeGaussian 
    Modifier and Type Constant Field Value
    public static final int EXCLUSION -1
    public static final int INCLUSION 1
  • com.actelion.research.gui.dnd.MoleculeDropAdapter 
    Modifier and Type Constant Field Value
    public static final boolean debug false
  • com.actelion.research.gui.dnd.ReactionDropAdapter 
    Modifier and Type Constant Field Value
    public static final boolean debug false
  • com.actelion.research.gui.hidpi.ColorUtils 
    Modifier and Type Constant Field Value
    public static final java.lang.String BLACK "#000000"

org.machinelearning.*

  • org.machinelearning.svm.libsvm.svm 
    Modifier and Type Constant Field Value
    public static final int LIBSVM_VERSION 323
  • org.machinelearning.svm.libsvm.svm_parameter 
    Modifier and Type Constant Field Value
    public static final int C_SVC 0
    public static final int EPSILON_SVR 3
    public static final int LINEAR 0
    public static final int NU_SVC 1
    public static final int NU_SVR 4
    public static final int ONE_CLASS 2
    public static final int POLY 1
    public static final int PRECOMPUTED 4
    public static final int RBF 2
    public static final int SIGMOID 3

org.openmolecules.*

smile.clustering.*

  • smile.clustering.Clustering<T> 
    Modifier and Type Constant Field Value
    public static final int OUTLIER 2147483647

smile.data.*

  • smile.data.Dataset<E> 
    Modifier and Type Constant Field Value
    protected static final java.lang.String DATASET_HAS_NO_RESPONSE "The dataset has no response values."
    protected static final java.lang.String RESPONSE_NOT_NOMINAL "The response variable is not nominal."
    protected static final java.lang.String RESPONSE_NOT_NUMERIC "The response variable is not numeric."

smile.math.*

  • smile.math.Math 
    Modifier and Type Constant Field Value
    public static final double E 2.718281828459045
    public static final double PI 3.141592653589793