Uses of Class
com.actelion.research.chem.descriptor.pharmacophoretree.PharmacophoreNode
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Packages that use PharmacophoreNode Package Description com.actelion.research.chem.descriptor.pharmacophoretree -
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Uses of PharmacophoreNode in com.actelion.research.chem.descriptor.pharmacophoretree
Methods in com.actelion.research.chem.descriptor.pharmacophoretree that return PharmacophoreNode Modifier and Type Method Description static PharmacophoreNode
PharmacophoreNode. decode(java.lang.String s)
Methods in com.actelion.research.chem.descriptor.pharmacophoretree that return types with arguments of type PharmacophoreNode Modifier and Type Method Description java.util.List<PharmacophoreNode>
PharmacophoreTree. getNodes()
java.util.List<PharmacophoreNode>
PharmacophoreTree. getNodes(java.util.Collection<java.lang.Integer> indeces)
Methods in com.actelion.research.chem.descriptor.pharmacophoretree with parameters of type PharmacophoreNode Modifier and Type Method Description static void
PharmacophoreTreeGenerator. addNode(PharmacophoreNode node, java.util.List<PharmacophoreNode> nodes, java.util.Map<java.lang.Integer,java.util.List<java.lang.Integer>> atomToNodes)
static java.lang.String
PharmacophoreNode. encode(PharmacophoreNode node)
void
PharmacophoreTree. removeNode(PharmacophoreNode node)
Method parameters in com.actelion.research.chem.descriptor.pharmacophoretree with type arguments of type PharmacophoreNode Modifier and Type Method Description static void
PharmacophoreTreeGenerator. addNode(PharmacophoreNode node, java.util.List<PharmacophoreNode> nodes, java.util.Map<java.lang.Integer,java.util.List<java.lang.Integer>> atomToNodes)
void
TreeMatcher.FeatureMatch. calculate(java.util.List<PharmacophoreNode> treeNodes1, java.util.List<PharmacophoreNode> treeNodes2)
static double
PharmacophoreNode. getSimilarity(java.util.Collection<PharmacophoreNode> nodes1, java.util.Collection<PharmacophoreNode> nodes2)
static double
PharmacophoreNode. getSimilarity(java.util.Collection<java.lang.Integer> nodes1, java.util.Collection<java.lang.Integer> nodes2, java.util.List<PharmacophoreNode> allNodes1, java.util.List<PharmacophoreNode> allNodes2)
Constructor parameters in com.actelion.research.chem.descriptor.pharmacophoretree with type arguments of type PharmacophoreNode Constructor Description PharmacophoreTree(java.util.List<PharmacophoreNode> nodes, java.util.List<int[]> edges)
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