Uses of Class
com.actelion.research.chem.Mutation
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Packages that use Mutation Package Description com.actelion.research.chem -
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Uses of Mutation in com.actelion.research.chem
Methods in com.actelion.research.chem that return types with arguments of type Mutation Modifier and Type Method Description java.util.ArrayList<Mutation>
Mutator. generateMutationList(StereoMolecule mol, int mutationType, boolean regulateSize)
Creates a list of possible mutations and their probabilitiesjava.util.ArrayList<Mutation>
Mutator. mutate(StereoMolecule mol)
Does an in-place mutation of the molecule allowing any kind of mutation at any of the molecules non-selected atoms aiming for 4-24 non-H atoms with an optimum of 9 atoms.java.util.ArrayList<Mutation>
Mutator. mutate(StereoMolecule mol, int mutationType, boolean regulateSize)
Does an in-place mutation of the molecule allowing the defined mutation kinds at any of the molecules unselected atoms.Methods in com.actelion.research.chem with parameters of type Mutation Modifier and Type Method Description void
Mutator. performMutation(StereoMolecule mol, Mutation mutation)
Performs the given mutation on the molecule, updates atom coordinates, and updates stereo bonds to reflect lost or new stereo centers.Method parameters in com.actelion.research.chem with type arguments of type Mutation Modifier and Type Method Description void
Mutator. mutate(StereoMolecule mol, java.util.ArrayList<Mutation> mutationList)
Selects a likely mutation from the list, performs the mutation and removes it from the list.void
Mutator. printMutationList(java.util.ArrayList<Mutation> mutationList, boolean sortByPriority)
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