Package | Description |
---|---|
pal.eval |
Classes for evaluating evolutionary hypothesis (chi-square and likelihood
criteria) and estimating model parameters.
|
pal.treesearch |
Modifier and Type | Method | Description |
---|---|---|
MolecularClockLikelihoodModel.External |
MolecularClockLikelihoodModel.Instance.createNewExternal(MolecularClockLikelihoodModel.HeightConverter converter) |
Modifier and Type | Method | Description |
---|---|---|
MolecularClockLikelihoodModel.External |
ConstraintModel.GroupManager.createNewClockExternal() |
|
MolecularClockLikelihoodModel.External |
FixedBSRDTGlobalClockModel.createNewClockExternal() |
|
MolecularClockLikelihoodModel.External |
FixedSRDTGlobalClockModel.createNewClockExternal() |
|
MolecularClockLikelihoodModel.External |
GlobalClockModel.createNewClockExternal() |
|
MolecularClockLikelihoodModel.External |
MRDTGlobalClockModel.createNewClockExternal() |
|
MolecularClockLikelihoodModel.External |
SRDTGlobalClockModel.createNewClockExternal() |
|
MolecularClockLikelihoodModel.External |
AbstractParentableConstrainedNode.obtainConstrainedExternalCalculator() |
|
MolecularClockLikelihoodModel.External |
GeneralConstraintGroupManager.obtainConstrainedExternalCalculator() |