Package | Description |
---|---|
pal.tree |
Classes for providing the data structure of
trees, for constructing and modifying trees, and for parameterizing
trees (e.g., clock constraint).
|
Modifier and Type | Method | Description |
---|---|---|
SimulatedAlignment |
SimulatedAlignment.Factory.generateAlignment(Tree tree) |
Generate a simulated alignment based on input tree
|
SimulatedAlignment[] |
SimulatedAlignment.Factory.generateAlignments(Tree[] trees,
AlgorithmCallback callback) |
Generate an array of simulated alignments based on an array of input trees
|