Package org.jmol.viewer
Class TransformManager4D
- java.lang.Object
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- org.jmol.viewer.TransformManager
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- org.jmol.viewer.TransformManager4D
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public class TransformManager4D extends TransformManager
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Field Summary
Fields Modifier and Type Field Description private boolean
is4D
private javajs.util.M4
m2_rotate
private javajs.util.M4
m3_toScreen
private javajs.util.M4
m4
private static int
MODE_3D
private static int
MODE_4D_WX
private static int
MODE_4D_WY
private static int
MODE_4D_WZ
private int
mouseMode
private javajs.util.T4
p4
private javajs.util.T3
v1
private javajs.util.V3
zero
private float
zOffset
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Fields inherited from class org.jmol.viewer.TransformManager
aaTest1, antialias, aperatureAngle, bsFrameOffsets, bsSelectedAtoms, camera, cameraDepth, cameraDepthSetting, cameraDistance, cameraDistanceFromCenter, cameraScaleFactor, cameraSetting, DEFAULT_CAMERA_DEPTH, DEFAULT_NAV_FPS, DEFAULT_PERSPECTIVE_DEPTH, DEFAULT_PERSPECTIVE_MODEL, DEFAULT_SPIN_FPS, DEFAULT_SPIN_Y, DEFAULT_STEREO_DEGREES, DEFAULT_VISUAL_RANGE, defaultMode, degreesPerRadian, depthPercentSetting, depthPlane, depthValue, doTransform4D, fixedRotationAxis, fixedRotationCenter, fixedRotationOffset, fixedTranslation, frameOffset, frameOffsets, fScrPt, haveNotifiedNaN, height, internalRotationAxis, internalRotationCenter, internalSlab, internalTranslation, iScrPt, isSpinFixed, isSpinInternal, isSpinSelected, matrixRotate, matrixStereo, matrixTemp, matrixTemp3, matrixTest, matrixTransform, matrixTransformInv, MAXIMUM_ZOOM_PERCENTAGE, mode, MODE_NAVIGATION, MODE_PERSPECTIVE_PYMOL, MODE_STANDARD, modelCenterOffset, modelRadius, modelRadiusPixels, movetoThread, NAV_MODE_IGNORE, NAV_MODE_NEWXY, NAV_MODE_NEWXYZ, NAV_MODE_NEWZ, NAV_MODE_NONE, NAV_MODE_RESET, NAV_MODE_ZOOMED, navFps, navigating, navigationCenter, navigationDepthPercent, navigationOffset, navigationShiftXY, navigationSlabOffset, navMode, navOn, navX, navY, navZ, perspectiveDepth, perspectiveModel, perspectiveOffset, perspectiveShiftXY, previousX, previousY, prevZoomSetting, ptOffset, ptTest1, ptTest2, ptTest3, ptVibTemp, referencePlaneOffset, rotationAxis, rotationRate, scale3D, scale3DAngstromsPerInch, scaleDefaultPixelsPerAngstrom, scalePixelsPerAngstrom, screenHeight, screenPixelCount, screenWidth, slabEnabled, slabPercentSetting, slabPlane, slabRange, slabValue, spinFps, spinOn, spinThread, spinX, spinY, spinZ, stereoColors, stereoDegrees, stereoDoubleDTI, stereoDoubleFull, stereoFrame, stereoMode, stereoRadians, untransformedPoint, vectorTemp, vibrationOn, vibrationPeriod, vibrationPeriodMs, vibrationThread, visualRangeAngstroms, vwr, width, windowCentered, xTranslationFraction, yTranslationFraction, zDepthPercentSetting, zDepthValue, zmPct, zmPctSet, zoomEnabled, zoomFactor, zShadeEnabled, zSlabPercentSetting, zSlabPoint, zSlabValue
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Constructor Summary
Constructors Constructor Description TransformManager4D()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
calcTransformMatrix()
private void
checkM2()
protected void
getScreenTemp(javajs.util.T3 ptXYZ)
void
resetRotation()
protected void
rotate4DBall(float xDelta, float yDelta, float zDelta)
protected void
rotateXYBy(float xDelta, float yDelta, javajs.util.BS bsAtoms)
void
setAsBallRotation(javajs.util.M4 m, float scale, float dx, float dy, float dz)
4D ball rotation from nominal dx, dy, dz motion.-
Methods inherited from class org.jmol.viewer.TransformManager
angstromsToPixels, calcCameraFactors, calcNavigationPoint, calcSlabAndDepthValues, centerAt, clear, clearThreads, defaultScaleToScreen, depthByPercentagePoints, depthToPercent, finalizeTransformParameters, getCameraDepth, getCameraFactors, getMoveToText, getNavigationOffset, getNavigationOffsetPercent, getNavigationState, getNavigationText, getNavPtHeight, getNewFixedRotationCenter, getOrientationInfo, getOrientationText, getPerspectiveDepth, getPerspectiveFactor, getRotation, getRotationQ, getRotationText, getSlabPercentSetting, getStereoRotationMatrix, getTransformManager, getTranslationScript, getTranslationXPercent, getTranslationYPercent, getVibrationPoint, getZoomSetting, homePosition, isInPosition, isNavigating, isVibrationOn, isWindowCentered, move, moveRotationCenter, moveTo, moveToPyMOL, navigateAxis, navigateKey, navigateList, navTranslatePercentOrTo, percentToPixels, resetNavigationPoint, rotate3DBall, rotateAboutPointsInternal, rotateAxisAngle, rotateAxisAngleAtCenter, rotateAxisAngleRadiansFixed, rotateAxisAngleRadiansInternal, rotatePoint, rotateXRadians, rotateYRadians, rotateZBy, rotateZRadians, scaleFitToScreen, scaleToPerspective, scaleToScreen, setAll, setAntialias, setCamera, setCameraDepthPercent, setCenter, setCenterAt, setDefaultPerspective, setFrameOffset, setNavFps, setNavigatePt, setNavigationDepthPercent, setNavigationMode, setNavigationOffsetRelative, setNavigationSlabOffsetPercent, setNavOn, setNavXYZ, setNewRotationCenter, setPerspectiveDepth, setRotation, setRotationPointXY, setRotationRadius, setScaleAngstromsPerInch, setScreenParameters, setSelectedTranslation, setSlabDepthInternal, setSlabEnabled, setSlabRange, setSpinFps, setSpinOff, setSpinOn, setSpinXYZ, setStereoDegrees, setStereoMode, setStereoMode2, setTranslationFractions, setVibrationPeriod, setVibrationScale, setVibrationT, setWindowCentered, setZoomEnabled, setZoomHeight, setZShadeEnabled, slabByPercentagePoints, slabDepthByPercentagePoints, slabInternal, slabReset, slabToPercent, spinXYBy, stopMotion, transformPt, transformPt2D, transformPt3f, transformPtNoClip, transformPtScr, transformPtScrT3, transformPtVib, translateToPercent, translateXYBy, translateZBy, unscaleToScreen, unTransformPoint, xyzIsSlabbedInternal, zDepthToPercent, zoomBy, zoomByFactor, zoomByPercent, zoomToPercent, zSlabToPercent, zValueFromPercent
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Field Detail
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MODE_3D
private static final int MODE_3D
- See Also:
- Constant Field Values
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MODE_4D_WX
private static final int MODE_4D_WX
- See Also:
- Constant Field Values
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MODE_4D_WY
private static final int MODE_4D_WY
- See Also:
- Constant Field Values
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MODE_4D_WZ
private static final int MODE_4D_WZ
- See Also:
- Constant Field Values
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is4D
private boolean is4D
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mouseMode
private int mouseMode
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m2_rotate
private javajs.util.M4 m2_rotate
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m3_toScreen
private final javajs.util.M4 m3_toScreen
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zOffset
private float zOffset
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v1
private final javajs.util.T3 v1
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m4
private final javajs.util.M4 m4
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p4
private javajs.util.T4 p4
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zero
private final javajs.util.V3 zero
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Method Detail
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resetRotation
public void resetRotation()
- Overrides:
resetRotation
in classTransformManager
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rotateXYBy
protected void rotateXYBy(float xDelta, float yDelta, javajs.util.BS bsAtoms)
- Overrides:
rotateXYBy
in classTransformManager
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rotate4DBall
protected void rotate4DBall(float xDelta, float yDelta, float zDelta)
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setAsBallRotation
public void setAsBallRotation(javajs.util.M4 m, float scale, float dx, float dy, float dz)
4D ball rotation from nominal dx, dy, dz motion.- Parameters:
m
-scale
-dx
-dy
-dz
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checkM2
private void checkM2()
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calcTransformMatrix
public void calcTransformMatrix()
- Overrides:
calcTransformMatrix
in classTransformManager
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getScreenTemp
protected void getScreenTemp(javajs.util.T3 ptXYZ)
- Overrides:
getScreenTemp
in classTransformManager
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