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#include <elxSumSquaredTissueVolumeDifferenceMetric.h>
A metric based on the itk::SumSquaredTissueVolumeDifferenceImageToImageMetric.
The parameters used in this class are:
Metric: Select this metric as follows:
(Metric "SumSquaredTissueVolumeDifference")
AirValue: Intensity value of air.
example: (AirValue -1000.0)
Default is -1000.0.
TissueValue: Intensity value of tissue.
example: (TissueValue 55.0)
Default is 55.0.
Definition at line 50 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
Static Public Member Functions | |
static Pointer | New () |
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static Pointer | New () |
Protected Member Functions | |
SumSquaredTissueVolumeDifferenceMetric () | |
virtual | ~SumSquaredTissueVolumeDifferenceMetric () |
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void | AfterThreadedGetValue (MeasureType &value) const |
void | AfterThreadedGetValueAndDerivative (MeasureType &measure, DerivativeType &derivative) const |
bool | EvaluateInverseSpatialJacobian (const SpatialJacobianType &spatialJacobian, const RealType spatialJacobianDeterminant, SpatialJacobianType &inverseSpatialJacobian) const |
void | EvaluateJacobianOfSpatialJacobianDeterminantInnerProduct (const JacobianOfSpatialJacobianType &jacobianOfSpatialJacobian, const SpatialJacobianType &inverseSpatialJacobian, DerivativeType &jacobianOfSpatialJacobianDeterminant) const |
void | EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const |
void | PrintSelf (std::ostream &os, Indent indent) const |
SumSquaredTissueVolumeDifferenceImageToImageMetric () | |
void | ThreadedGetValue (ThreadIdType threadID) |
void | ThreadedGetValueAndDerivative (ThreadIdType threadId) |
void | UpdateValueAndDerivativeTerms (const RealType fixedImageValue, const RealType movingImageValue, const DerivativeType &imageJacobian, const NonZeroJacobianIndicesType &nzji, const RealType spatialJacobianDeterminant, const DerivativeType &jacobianOfSpatialJacobianDeterminant, MeasureType &measure, DerivativeType &deriv) const |
virtual | ~SumSquaredTissueVolumeDifferenceImageToImageMetric () |
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AdvancedImageToImageMetric () | |
virtual void | CheckForAdvancedTransform (void) |
virtual void | CheckForBSplineInterpolator (void) |
virtual void | CheckForBSplineTransform (void) const |
virtual void | CheckNumberOfSamples (unsigned long wanted, unsigned long found) const |
virtual void | ComputeFixedImageExtrema (const FixedImageType *image, const FixedImageRegionType ®ion) |
virtual void | ComputeMovingImageExtrema (const MovingImageType *image, const MovingImageRegionType ®ion) |
virtual bool | EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const |
virtual bool | EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const |
virtual void | InitializeImageSampler (void) throw ( ExceptionObject ) |
virtual void | InitializeLimiters (void) |
virtual void | InitializeThreadingParameters (void) const |
virtual bool | IsInsideMovingMask (const MovingImagePointType &point) const |
itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct) | |
itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct) | |
itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct) | |
itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct) | |
void | LaunchGetValueAndDerivativeThreaderCallback (void) const |
void | LaunchGetValueThreaderCallback (void) const |
void | PrintSelf (std::ostream &os, Indent indent) const |
virtual void | SetUseFixedImageLimiter (bool _arg) |
virtual void | SetUseImageSampler (bool _arg) |
virtual void | SetUseMovingImageLimiter (bool _arg) |
virtual bool | TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const |
virtual | ~AdvancedImageToImageMetric () |
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virtual MeasureType | GetExactValue (const ParametersType ¶meters) |
MetricBase () | |
virtual | ~MetricBase () |
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BaseComponentSE () | |
virtual | ~BaseComponentSE () |
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BaseComponent () | |
virtual | ~BaseComponent () |
Private Member Functions | |
void | operator= (const Self &) |
SumSquaredTissueVolumeDifferenceMetric (const Self &) | |
typedef Superclass2::ConfigurationPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ConfigurationPointer |
Definition at line 137 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass2::ConfigurationType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ConfigurationType |
Definition at line 136 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef itk::SmartPointer<const Self> elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ConstPointer |
Definition at line 65 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::CoordinateRepresentationType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::CoordinateRepresentationType |
Typedefs from the superclass.
Definition at line 81 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::DerivativeType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::DerivativeType |
Definition at line 107 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass2::ElastixPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ElastixPointer |
Definition at line 135 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass2::ElastixType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ElastixType |
Typedef's inherited from Elastix.
Definition at line 134 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImageConstPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImageConstPointer |
Definition at line 86 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImageLimiterOutputType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImageLimiterOutputType |
Definition at line 119 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImageLimiterType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImageLimiterType |
Definition at line 116 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImageMaskPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImageMaskPointer |
Definition at line 103 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImageMaskType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImageMaskType |
Definition at line 102 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImagePixelType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImagePixelType |
Definition at line 109 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImageRegionType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImageRegionType |
Definition at line 87 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::FixedImageType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::FixedImageType |
Definition at line 85 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::GradientImageFilterPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::GradientImageFilterPointer |
Definition at line 101 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::GradientImageFilterType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::GradientImageFilterType |
Definition at line 100 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::GradientImagePointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::GradientImagePointer |
Definition at line 99 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::GradientImageType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::GradientImageType |
Definition at line 98 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::GradientPixelType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::GradientPixelType |
Definition at line 97 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::ImageSampleContainerPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ImageSampleContainerPointer |
Definition at line 115 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::ImageSampleContainerType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ImageSampleContainerType |
Definition at line 113 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::ImageSamplerPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ImageSamplerPointer |
Definition at line 112 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::ImageSamplerType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ImageSamplerType |
Definition at line 111 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::InputPointType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::InputPointType |
Definition at line 90 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::InterpolatorPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::InterpolatorPointer |
Definition at line 95 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::InterpolatorType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::InterpolatorType |
Definition at line 94 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass2::ITKBaseType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ITKBaseType |
Definition at line 140 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MeasureType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MeasureType |
Definition at line 106 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageConstPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageConstPointer |
Definition at line 84 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageDerivativeScalesType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageDerivativeScalesType |
Definition at line 123 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageLimiterOutputType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageLimiterOutputType |
Definition at line 121 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageLimiterType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageLimiterType |
Definition at line 117 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageMaskPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageMaskPointer |
Definition at line 105 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageMaskType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageMaskType |
Definition at line 104 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImagePixelType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImagePixelType |
Definition at line 83 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageRegionType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageRegionType |
Definition at line 110 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::MovingImageType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::MovingImageType |
Definition at line 82 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::OutputPointType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::OutputPointType |
Definition at line 91 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::ParametersType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ParametersType |
Definition at line 108 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef itk::SmartPointer<Self> elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Pointer |
Definition at line 64 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::RealType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::RealType |
Definition at line 96 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass2::RegistrationPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::RegistrationPointer |
Definition at line 139 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass2::RegistrationType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::RegistrationType |
Definition at line 138 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef SumSquaredTissueVolumeDifferenceMetric elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Self |
Standard ITK-stuff.
Definition at line 59 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< typename MetricBase<TElastix>::FixedImageType, typename MetricBase<TElastix>::MovingImageType > elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Superclass1 |
Definition at line 62 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef MetricBase<TElastix> elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Superclass2 |
Definition at line 63 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::TransformJacobianType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::TransformJacobianType |
Definition at line 93 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::TransformParametersType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::TransformParametersType |
Definition at line 92 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::TransformPointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::TransformPointer |
Definition at line 89 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
typedef Superclass1::TransformType elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::TransformType |
Definition at line 88 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
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inlineprotected |
The constructor.
Definition at line 158 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
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inlineprotectedvirtual |
The destructor.
Definition at line 160 of file elxSumSquaredTissueVolumeDifferenceMetric.h.
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private |
The private constructor.
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virtual |
Do some things before each resolution:
Reimplemented from elastix::BaseComponent.
elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::elxClassNameMacro | ( | "SumSquaredTissueVolumeDifference" | ) |
Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "SumSquaredTissueVolumeDifference")
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virtual |
Run-time type information (and related methods).
Reimplemented from elastix::MetricBase< TElastix >.
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virtual |
Sets up a timer to measure the initialization time and calls the Superclass' implementation.
Reimplemented from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >.
elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::itkStaticConstMacro | ( | FixedImageDimension | , |
unsigned | int, | ||
FixedImageType::ImageDimension | |||
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The fixed image dimension.
elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::itkStaticConstMacro | ( | MovingImageDimension | , |
unsigned | int, | ||
MovingImageType::ImageDimension | |||
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The moving image dimension.
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static |
Method for creation through the object factory.
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private |
The private copy constructor.
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