Class EmblId
- java.lang.Object
-
- org.biojava.nbio.core.sequence.io.embl.EmblId
-
public class EmblId extends java.lang.Object
This class contains the processed data of embl file Primary accession number Sequence version number Topology: 'circular' or 'linear' Molecule type Data class Taxonomic division Sequence length- Since:
- 5.0.0
- Author:
- Noor Aldeen Al Mbaidin
-
-
Constructor Summary
Constructors Constructor Description EmblId(java.lang.String primaryAccession, java.lang.String sequenceVersion, java.lang.String topology, java.lang.String moleculeType, java.lang.String dataClass, java.lang.String taxonomicDivision, java.lang.String sequenceLength)
-
Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.String
getDataClass()
java.lang.String
getMoleculeType()
Molecule type this represents the type of molecule as storedjava.lang.String
getPrimaryAccession()
java.lang.String
getSequenceLength()
Sequence length The last item on the ID line is the length of the sequence (the total number of bases in the sequence).java.lang.String
getSequenceVersion()
return the sequence versionjava.lang.String
getTaxonomicDivision()
java.lang.String
getTopology()
-
-
-
Method Detail
-
getPrimaryAccession
public java.lang.String getPrimaryAccession()
- Returns:
- String
-
getSequenceVersion
public java.lang.String getSequenceVersion()
return the sequence version- Returns:
- String
-
getTopology
public java.lang.String getTopology()
-
getMoleculeType
public java.lang.String getMoleculeType()
Molecule type this represents the type of molecule as stored- Returns:
- String
-
getDataClass
public java.lang.String getDataClass()
-
getTaxonomicDivision
public java.lang.String getTaxonomicDivision()
- Returns:
- String
-
getSequenceLength
public java.lang.String getSequenceLength()
Sequence length The last item on the ID line is the length of the sequence (the total number of bases in the sequence). This number includes base positions reported as present but undetermined (coded as "N").- Returns:
- String
-
-