Interface MutableSequencePair<S extends Sequence<C>,​C extends Compound>

    • Method Detail

      • setQuery

        void setQuery​(AlignedSequence<S,​C> query)
        Sets the first AlignedSequence of the pair.
        Parameters:
        query - becomes the first AlignedSequence of the pair
        Throws:
        java.lang.IllegalArgumentException - if (new) query and (old) target are different lengths
      • setTarget

        void setTarget​(AlignedSequence<S,​C> target)
        Sets the second AlignedSequence of the pair.
        Parameters:
        target - becomes the second AlignedSequence of the pair
        Throws:
        java.lang.IllegalArgumentException - if (old) query and (new) target are different lengths