Class TwoBitSequenceReader.TwoBitArrayWorker<C extends NucleotideCompound>

  • Type Parameters:
    C - Must extend NucleotideCompound
    Enclosing class:
    TwoBitSequenceReader<C extends NucleotideCompound>

    public static class TwoBitSequenceReader.TwoBitArrayWorker<C extends NucleotideCompound>
    extends BitSequenceReader.BitArrayWorker<C>
    Extension of the BitArrayWorker which provides the 2bit implementation code. This is intended to work with the 4 basic nucelotide types. If you require a different version of the encoding used here then extend and override as required.