Class InsdcLocations


  • public class InsdcLocations
    extends java.lang.Object
    A collection of locations which are used whenever we work with INSDC; some of which could be deprecated (from INSDC's point of view) yet appear in records.
    Author:
    ayates, Paolo Pavan
    • Nested Class Summary

      Nested Classes 
      Modifier and Type Class Description
      static class  InsdcLocations.BondLocation
      Used to represent bond locations equivalent to bond(7,8) or bond(7).
      static class  InsdcLocations.GroupLocation
      Deprecated in INSDC yet still appears; equivalent to the order() directive except no 5' to 3' ordering is defined.
      static class  InsdcLocations.OneOfLocation
      Deprecated in INSDC; refers to a set of locations of which one location could be valid e.g.
      static class  InsdcLocations.OrderLocation
      Used to describe a 5' to 3' ordering but no firm assurance it is correct
    • Constructor Summary

      Constructors 
      Constructor Description
      InsdcLocations()  
    • Method Summary

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Constructor Detail

      • InsdcLocations

        public InsdcLocations()