org.biojava3.phylo
Class CheckTreeAccuracy
java.lang.Object
org.biojava3.phylo.CheckTreeAccuracy
public class CheckTreeAccuracy
- extends Object
- Author:
- Scooter
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
CheckTreeAccuracy
public CheckTreeAccuracy()
copyMatrix
public static DistanceMatrix copyMatrix(DistanceMatrix matrix)
process
public void process(Phylogeny tree,
DistanceMatrix matrix)
getNodeDistance
public double getNodeDistance(PhylogenyNode parentNode,
PhylogenyNode childNode)
findCommonParent
public PhylogenyNode findCommonParent(PhylogenyNode node)
markPathToRoot
public void markPathToRoot(PhylogenyNode node,
boolean value)