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C
- The type of compound to editpublic interface Edit<C extends Compound>
Interface for carrying out edit operations on a Sequence. The 3 major methods of Editing are supported
Nested Class Summary | |
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static class |
Edit.AbstractEdit<C extends Compound>
Abstract class which defines all edit operations as a call to discover what 5' and 3' ends of an editing Sequence should be joined together with a target Sequence. |
static class |
Edit.Delete<C extends Compound>
Implementation which allows for the deletion of bases from a Sequence |
static class |
Edit.Insert<C extends Compound>
Edit implementation which allows us to insert a base at any position in a Sequence. |
static class |
Edit.Substitute<C extends Compound>
Allows for the substitution of bases into an existing Sequence. |
Method Summary | |
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Sequence<C> |
edit(Sequence<C> sequence)
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Method Detail |
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Sequence<C> edit(Sequence<C> sequence)
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