org.biojava3.ws.hmmer
Class HmmerResult

java.lang.Object
  extended by org.biojava3.ws.hmmer.HmmerResult
All Implemented Interfaces:
Comparable<HmmerResult>

public class HmmerResult
extends Object
implements Comparable<HmmerResult>

The results of a Hmmer search for a single sequence

Since:
3.0.3
Author:
Andreas Prlic

Constructor Summary
HmmerResult()
           
 
Method Summary
 int compareTo(HmmerResult o)
           
 String getAcc()
           
 Integer getDcl()
           
 String getDesc()
           
 SortedSet<HmmerDomain> getDomains()
           
 Float getEvalue()
           
 String getName()
           
 Integer getNdom()
           
 Integer getNreported()
           
 Double getPvalue()
           
 Float getScore()
           
 void setAcc(String acc)
           
 void setDcl(Integer dcl)
           
 void setDesc(String desc)
           
 void setDomains(SortedSet<HmmerDomain> domains)
           
 void setEvalue(Float evalue)
           
 void setName(String name)
           
 void setNdom(Integer ndom)
           
 void setNreported(Integer nreported)
           
 void setPvalue(Double pvalue)
           
 void setScore(Float score)
           
 String toString()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

HmmerResult

public HmmerResult()
Method Detail

getDomains

public SortedSet<HmmerDomain> getDomains()

setDomains

public void setDomains(SortedSet<HmmerDomain> domains)

getDesc

public String getDesc()

setDesc

public void setDesc(String desc)

getScore

public Float getScore()

setScore

public void setScore(Float score)

getEvalue

public Float getEvalue()

setEvalue

public void setEvalue(Float evalue)

getPvalue

public Double getPvalue()

setPvalue

public void setPvalue(Double pvalue)

getAcc

public String getAcc()

setAcc

public void setAcc(String acc)

getDcl

public Integer getDcl()

setDcl

public void setDcl(Integer dcl)

getName

public String getName()

setName

public void setName(String name)

getNdom

public Integer getNdom()

setNdom

public void setNdom(Integer ndom)

getNreported

public Integer getNreported()

setNreported

public void setNreported(Integer nreported)

toString

public String toString()
Overrides:
toString in class Object

compareTo

public int compareTo(HmmerResult o)
Specified by:
compareTo in interface Comparable<HmmerResult>