org.biojava.bio.structure.scop
Class ScopDomain

java.lang.Object
  extended by org.biojava.bio.structure.scop.ScopDomain
All Implemented Interfaces:
Serializable, Cloneable

public class ScopDomain
extends Object
implements Serializable, Cloneable

Container for the information for a domain. Contains a line in the file dir.cla.scop.txt_1.75 e.g d1dlwa_ 1dlw A: a.1.1.1 14982 cl=46456,cf=46457,sf=46458,fa=46459,dm=46460,sp=46461,px=14982

Author:
Andreas Prlic
See Also:
Serialized Form

Constructor Summary
ScopDomain()
           
 
Method Summary
protected  Object clone()
           
 int getClassId()
           
 String getClassificationId()
           
 int getDomainId()
           
 int getFamilyId()
           
 int getFoldId()
           
 String getPdbId()
           
 int getPx()
           
 List<String> getRanges()
           
 String getScopId()
           
 int getSpeciesId()
           
 Integer getSunid()
           
 int getSuperfamilyId()
           
 void setClassId(int classId)
           
 void setClassificationId(String classificationId)
           
 void setDomainId(int domainId)
           
 void setFamilyId(int familyId)
           
 void setFoldId(int foldId)
           
 void setPdbId(String pdbId)
           
 void setPx(int px)
           
 void setRanges(List<String> ranges)
           
 void setScopId(String scopId)
           
 void setSpeciesId(int speciesId)
           
 void setSunid(Integer sunid)
           
 void setSuperfamilyId(int superfamilyId)
           
 String toString()
           
 
Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

ScopDomain

public ScopDomain()
Method Detail

toString

public String toString()
Overrides:
toString in class Object

getScopId

public String getScopId()

setScopId

public void setScopId(String scopId)

getPdbId

public String getPdbId()

setPdbId

public void setPdbId(String pdbId)

getRanges

public List<String> getRanges()

setRanges

public void setRanges(List<String> ranges)

getClassificationId

public String getClassificationId()

setClassificationId

public void setClassificationId(String classificationId)

getSunid

public Integer getSunid()

setSunid

public void setSunid(Integer sunid)

getClassId

public int getClassId()

setClassId

public void setClassId(int classId)

getFoldId

public int getFoldId()

setFoldId

public void setFoldId(int foldId)

getSuperfamilyId

public int getSuperfamilyId()

setSuperfamilyId

public void setSuperfamilyId(int superfamilyId)

getFamilyId

public int getFamilyId()

setFamilyId

public void setFamilyId(int familyId)

getDomainId

public int getDomainId()

setDomainId

public void setDomainId(int domainId)

getSpeciesId

public int getSpeciesId()

setSpeciesId

public void setSpeciesId(int speciesId)

getPx

public int getPx()

setPx

public void setPx(int px)

clone

protected Object clone()
                throws CloneNotSupportedException
Overrides:
clone in class Object
Throws:
CloneNotSupportedException