Package org.biojava.bio.structure.align.gui

Interface Summary
AlignmentCalculationRunnable  
 

Class Summary
AboutDialog  
AlignmentCalc A class that obtains two structures via DAS and aligns them This is done in a separate thread.
AlignmentCalcDB  
AlignmentGui A JFrame that allows to trigger a pairwise structure alignment, either from files in a directory, or after manual upload.
AlignmentTextPanel  
ChooseDirAction Ask the user to provide a directory containting PDB files.
ConfigPDBInstallPanel  
DBResultTable  
DBSearchGUI  
DisplayAFP A utility class for visualistion of structure alignments
DotPlotPanel Displays the dot plot trace for an alignment.
GUIAlignmentProgressListener a GUI that allows to watch progress as multiple alignments are being processed.
GUIFarmJobRunnable  
HelpDialog  
JPrintPanel  
MenuCreator Create the menu for Fatcat/CE structure alignment stuff
MyAlignmentLoadListener  
MyDistMaxListener  
MyExportListener  
MyOpenPdbFileListener  
MySaveFileListener  
MyTableRowSorter  
ParameterGUI  
SelectPDBPanel A Panel that allows user to specify PDB & chain ID, as well as sub-ranges
ShowPDBIDListener  
StructureAlignmentDisplay  
SystemInfo