org.biojava.bio.structure.align.pairwise
Class AlignmentProgressListener

java.lang.Object
  extended by org.biojava.bio.structure.align.pairwise.AlignmentProgressListener

public class AlignmentProgressListener
extends Object

A class to listen to progress of the structure alignmnent calcualtions

Author:
andreas

Constructor Summary
AlignmentProgressListener()
           
 
Method Summary
 void calculatedFragmentPairs(List<FragmentPair> fragments)
           
 void jointFragments(JointFragments[] fragments)
           
 void startingAlignment(String name1, Atom[] ca1, String name2, Atom[] ca2)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

AlignmentProgressListener

public AlignmentProgressListener()
Method Detail

startingAlignment

public void startingAlignment(String name1,
                              Atom[] ca1,
                              String name2,
                              Atom[] ca2)

calculatedFragmentPairs

public void calculatedFragmentPairs(List<FragmentPair> fragments)

jointFragments

public void jointFragments(JointFragments[] fragments)