org.biojava3.genome.parsers.geneid
Class GeneIDXMLReader

java.lang.Object
  extended by org.biojava3.genome.parsers.geneid.GeneIDXMLReader

public class GeneIDXMLReader
extends Object

Author:
Scooter Willis

Constructor Summary
GeneIDXMLReader(String geneidXMLFile)
           
 
Method Summary
 LinkedHashMap<String,DNASequence> getDNACodingSequences()
           
 LinkedHashMap<String,ProteinSequence> getProteinSequences()
           
static void main(String[] args)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

GeneIDXMLReader

public GeneIDXMLReader(String geneidXMLFile)
                throws Exception
Throws:
Exception
Method Detail

getProteinSequences

public LinkedHashMap<String,ProteinSequence> getProteinSequences()
                                                          throws Exception
Throws:
Exception

getDNACodingSequences

public LinkedHashMap<String,DNASequence> getDNACodingSequences()
                                                        throws Exception
Throws:
Exception

main

public static void main(String[] args)