org.biojava.bio.structure.align.model
Class AFP

java.lang.Object
  extended by org.biojava.bio.structure.align.model.AFP
All Implemented Interfaces:
Serializable

public class AFP
extends Object
implements Serializable

A class to represent a FATCAT AFP

Author:
Andreas Prlic
See Also:
Serialized Form

Constructor Summary
AFP()
           
 
Method Summary
 int getFragLen()
           
 long getId()
           
 Matrix getM()
           
 int getP1()
           
 int getP2()
           
 double getRmsd()
           
 double getScore()
           
 double[] getT()
           
 void setFragLen(int fragLen)
           
 void setId(long id)
           
 void setM(Matrix m)
           
 void setP1(int p1)
           
 void setP2(int p2)
           
 void setRmsd(double rmsd)
           
 void setScore(double score)
           
 void setT(double[] t)
           
 String toString()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

AFP

public AFP()
Method Detail

toString

public String toString()
Overrides:
toString in class Object

getId

public long getId()

setId

public void setId(long id)

getP1

public int getP1()

setP1

public void setP1(int p1)

getP2

public int getP2()

setP2

public void setP2(int p2)

getFragLen

public int getFragLen()

setFragLen

public void setFragLen(int fragLen)

getRmsd

public double getRmsd()

setRmsd

public void setRmsd(double rmsd)

getM

public Matrix getM()

setM

public void setM(Matrix m)

getT

public double[] getT()

setT

public void setT(double[] t)

getScore

public double getScore()

setScore

public void setScore(double score)