|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
public interface GenomeWideCombinableDomains
Nested Class Summary | |
---|---|
static class |
GenomeWideCombinableDomains.GenomeWideCombinableDomainsSortOrder
|
Method Summary | |
---|---|
boolean |
contains(DomainId key_id)
|
CombinableDomains |
get(DomainId key_id)
|
SortedMap<DomainId,CombinableDomains> |
getAllCombinableDomainsIds()
|
SortedSet<DomainId> |
getAllDomainIds()
This should return all domains ids present in the genome. |
BinaryDomainCombination.DomainCombinationType |
getDomainCombinationType()
|
SortedSet<DomainId> |
getMostPromiscuosDomain()
|
DescriptiveStatistics |
getPerGenomeDomainPromiscuityStatistics()
This should return a statistic for per domain promiscuity in a genome. |
int |
getSize()
|
Species |
getSpecies()
|
SortedSet<BinaryDomainCombination> |
toBinaryDomainCombinations()
This should return all binary domain combinations present in the genome. |
StringBuilder |
toStringBuilder(GenomeWideCombinableDomains.GenomeWideCombinableDomainsSortOrder order)
|
Method Detail |
---|
boolean contains(DomainId key_id)
CombinableDomains get(DomainId key_id)
SortedMap<DomainId,CombinableDomains> getAllCombinableDomainsIds()
SortedSet<DomainId> getAllDomainIds()
BinaryDomainCombination.DomainCombinationType getDomainCombinationType()
SortedSet<DomainId> getMostPromiscuosDomain()
DescriptiveStatistics getPerGenomeDomainPromiscuityStatistics()
int getSize()
Species getSpecies()
SortedSet<BinaryDomainCombination> toBinaryDomainCombinations()
StringBuilder toStringBuilder(GenomeWideCombinableDomains.GenomeWideCombinableDomainsSortOrder order)
|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |