|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
S
- each Sequence
of the alignment pair is of type SC
- each element of a Sequence is a Compound
of type Cpublic interface PairwiseSequenceScorer<S extends Sequence<C>,C extends Compound>
Defines an algorithm which computes a score for a pair of sequences.
Method Summary | |
---|---|
S |
getQuery()
Returns the first sequence of the pair. |
S |
getTarget()
Returns the second sequence of the pair. |
Methods inherited from interface org.biojava3.alignment.template.Scorer |
---|
getDistance, getDistance, getMaxScore, getMinScore, getScore, getSimilarity, getSimilarity |
Method Detail |
---|
S getQuery()
S getTarget()
|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |