org.forester.phylogenyinference
Interface DistanceMatrix

All Known Implementing Classes:
BasicSymmetricalDistanceMatrix

public interface DistanceMatrix


Nested Class Summary
static class DistanceMatrix.Format
           
 
Method Summary
 String getIdentifier(int i)
           
 int getIndex(String identifier)
           
 int getSize()
           
 double getValue(int col, int row)
           
 void setIdentifier(int i, String identifier)
           
 void setValue(int col, int row, double distance)
           
 StringBuffer toStringBuffer(DistanceMatrix.Format format)
           
 

Method Detail

getIdentifier

String getIdentifier(int i)

getIndex

int getIndex(String identifier)

getSize

int getSize()

getValue

double getValue(int col,
                int row)

setIdentifier

void setIdentifier(int i,
                   String identifier)

setValue

void setValue(int col,
              int row,
              double distance)

toStringBuffer

StringBuffer toStringBuffer(DistanceMatrix.Format format)