org.biojava.bio.structure.scop
Class BerkeleyScopInstallation
java.lang.Object
org.biojava.bio.structure.scop.ScopInstallation
org.biojava.bio.structure.scop.BerkeleyScopInstallation
- All Implemented Interfaces:
- ScopDatabase
public class BerkeleyScopInstallation
- extends ScopInstallation
- implements ScopDatabase
Methods inherited from class org.biojava.bio.structure.scop.ScopInstallation |
downloadFileFromRemote, ensureClaInstalled, ensureDesInstalled, ensureHieInstalled, filterByClassificationId, filterByDescription, filterByDomainName, getByCategory, getCacheLocation, getClaFilename, getDesFilename, getDomainByScopID, getDomainsForPDB, getHieFilename, getScopDescriptionBySunid, getScopDomainsBySunid, getScopDownloadURL, getScopNode, getScopVersion, getTree, setCacheLocation, setScopDownloadURL, setScopVersion |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface org.biojava.bio.structure.scop.ScopDatabase |
filterByClassificationId, filterByDescription, filterByDomainName, getByCategory, getDomainByScopID, getDomainsForPDB, getScopDescriptionBySunid, getScopDomainsBySunid, getScopNode, getScopVersion, getTree |
claFileName
public static final String claFileName
- See Also:
- Constant Field Values
desFileName
public static final String desFileName
- See Also:
- Constant Field Values
hieFileName
public static final String hieFileName
- See Also:
- Constant Field Values
BerkeleyScopInstallation
public BerkeleyScopInstallation()
downloadClaFile
protected void downloadClaFile()
throws FileNotFoundException,
IOException
- Overrides:
downloadClaFile
in class ScopInstallation
- Throws:
FileNotFoundException
IOException
downloadDesFile
protected void downloadDesFile()
throws FileNotFoundException,
IOException
- Overrides:
downloadDesFile
in class ScopInstallation
- Throws:
FileNotFoundException
IOException
downloadHieFile
protected void downloadHieFile()
throws FileNotFoundException,
IOException
- Overrides:
downloadHieFile
in class ScopInstallation
- Throws:
FileNotFoundException
IOException