org.biojava3.alignment
Enum Alignments.PairInProfileScorerType

java.lang.Object
  extended by java.lang.Enum<Alignments.PairInProfileScorerType>
      extended by org.biojava3.alignment.Alignments.PairInProfileScorerType
All Implemented Interfaces:
Serializable, Comparable<Alignments.PairInProfileScorerType>
Enclosing class:
Alignments

public static enum Alignments.PairInProfileScorerType
extends Enum<Alignments.PairInProfileScorerType>

List of implemented sequence pair in a profile scoring routines.


Enum Constant Summary
IDENTITIES
           
SIMILARITIES
           
 
Method Summary
static Alignments.PairInProfileScorerType valueOf(String name)
          Returns the enum constant of this type with the specified name.
static Alignments.PairInProfileScorerType[] values()
          Returns an array containing the constants of this enum type, in the order they are declared.
 
Methods inherited from class java.lang.Enum
clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
 
Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait
 

Enum Constant Detail

IDENTITIES

public static final Alignments.PairInProfileScorerType IDENTITIES

SIMILARITIES

public static final Alignments.PairInProfileScorerType SIMILARITIES
Method Detail

values

public static Alignments.PairInProfileScorerType[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:
for (Alignments.PairInProfileScorerType c : Alignments.PairInProfileScorerType.values())
    System.out.println(c);

Returns:
an array containing the constants of this enum type, in the order they are declared

valueOf

public static Alignments.PairInProfileScorerType valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:
name - the name of the enum constant to be returned.
Returns:
the enum constant with the specified name
Throws:
IllegalArgumentException - if this enum type has no constant with the specified name
NullPointerException - if the argument is null