Package org.biojava.bio.structure.scop

Parsers and API for SCOP, Structural Classification of Proteins.

See:
          Description

Interface Summary
ScopDatabase General API how to interact with SCOP
 

Class Summary
BerkeleyScopInstallation  
CachedRemoteScopInstallation An extension of the RemoteScopInstallation that caches some of the data locally.
RemoteScopInstallation A class that fetches information about SCOP from a remote data-source.
ScopDescription Contains data from dir.des.scop.txt_1.75
ScopDomain Container for the information for a domain.
ScopFactory Controls the global ScopDatabase being used.
ScopInstallation This class provides access to the SCOP protein structure classification.
ScopNode  
 

Enum Summary
ScopCategory The various categories provided by SCOP.
 

Package org.biojava.bio.structure.scop Description

Parsers and API for SCOP, Structural Classification of Proteins. See DemoSCOP.java for an example.