org.biojava.bio.structure.align
Class CallableStructureAlignment
java.lang.Object
org.biojava.bio.structure.align.CallableStructureAlignment
- All Implemented Interfaces:
- Callable<AFPChain>
public class CallableStructureAlignment
- extends Object
- implements Callable<AFPChain>
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
CallableStructureAlignment
public CallableStructureAlignment()
call
public AFPChain call()
throws Exception
- Specified by:
call
in interface Callable<AFPChain>
- Throws:
Exception
getPair
public PdbPair getPair()
setPair
public void setPair(PdbPair pair)
getCache
public AtomCache getCache()
setCache
public void setCache(AtomCache cache)
getOutFile
public SynchronizedOutFile getOutFile()
setOutFile
public void setOutFile(SynchronizedOutFile outFile)
getCa1
public Atom[] getCa1()
setCa1
public void setCa1(Atom[] ca1)
setOutputDir
public void setOutputDir(File outFileF)
setAlgorithmName
public void setAlgorithmName(String algorithmName)
setParameters
public void setParameters(ConfigStrucAligParams parameters)