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Class Summary | |
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ComplementSequenceView<C extends ComplementCompound> | For a given sequence this class will create a view over the top of it and for every request the code will return the complement of the underlying base e.g. |
ReversedSequenceView<C extends Compound> | For a given sequence this class will return the base at the reversed position i.e. |
RnaSequenceView | Attempts to do on the fly translation of RNA by not requesting the compounds until asked. |
WindowedSequence<C extends Compound> | A sliding window view of a sequence which does not implement any
interfaces like Sequence because they do not fit how this works. |
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