org.biojava.bio.structure.align.gui.aligpanel
Class StatusDisplay

java.lang.Object
  extended by java.awt.Component
      extended by java.awt.Container
          extended by javax.swing.JComponent
              extended by javax.swing.text.JTextComponent
                  extended by javax.swing.JTextField
                      extended by org.biojava.bio.structure.align.gui.aligpanel.StatusDisplay
All Implemented Interfaces:
WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, Scrollable, SwingConstants, AlignmentPositionListener

public class StatusDisplay
extends JTextField
implements AlignmentPositionListener, WindowListener

See Also:
Serialized Form

Nested Class Summary
 
Nested classes/interfaces inherited from class javax.swing.JTextField
JTextField.AccessibleJTextField
 
Nested classes/interfaces inherited from class javax.swing.text.JTextComponent
JTextComponent.AccessibleJTextComponent, JTextComponent.DropLocation, JTextComponent.KeyBinding
 
Nested classes/interfaces inherited from class javax.swing.JComponent
JComponent.AccessibleJComponent
 
Nested classes/interfaces inherited from class java.awt.Container
Container.AccessibleAWTContainer
 
Nested classes/interfaces inherited from class java.awt.Component
Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy
 
Field Summary
 
Fields inherited from class javax.swing.JTextField
notifyAction
 
Fields inherited from class javax.swing.text.JTextComponent
DEFAULT_KEYMAP, FOCUS_ACCELERATOR_KEY
 
Fields inherited from class javax.swing.JComponent
accessibleContext, listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW
 
Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
 
Fields inherited from interface javax.swing.SwingConstants
BOTTOM, CENTER, EAST, HORIZONTAL, LEADING, LEFT, NEXT, NORTH, NORTH_EAST, NORTH_WEST, PREVIOUS, RIGHT, SOUTH, SOUTH_EAST, SOUTH_WEST, TOP, TRAILING, VERTICAL, WEST
 
Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH
 
Constructor Summary
StatusDisplay()
           
 
Method Summary
 void destroy()
           
 AFPChain getAfpChain()
           
 Atom[] getCa1()
           
 Atom[] getCa2()
           
 void mouseOverPosition(AlignedPosition p)
           
 void positionSelected(AlignedPosition p)
           
 void rangeSelected(AlignedPosition start, AlignedPosition end)
           
 void selectionLocked()
           
 void selectionUnlocked()
           
 void setAfpChain(AFPChain afpChain)
           
 void setCa1(Atom[] ca1)
           
 void setCa2(Atom[] ca2)
           
 void toggleSelection(AlignedPosition p)
           
 void windowActivated(WindowEvent e)
           
 void windowClosed(WindowEvent e)
           
 void windowClosing(WindowEvent e)
           
 void windowDeactivated(WindowEvent e)
           
 void windowDeiconified(WindowEvent e)
           
 void windowIconified(WindowEvent e)
           
 void windowOpened(WindowEvent e)
           
 
Methods inherited from class javax.swing.JTextField
actionPropertyChanged, addActionListener, configurePropertiesFromAction, createActionPropertyChangeListener, createDefaultModel, fireActionPerformed, getAccessibleContext, getAction, getActionListeners, getActions, getColumns, getColumnWidth, getHorizontalAlignment, getHorizontalVisibility, getPreferredSize, getScrollOffset, getUIClassID, isValidateRoot, paramString, postActionEvent, removeActionListener, scrollRectToVisible, setAction, setActionCommand, setColumns, setDocument, setFont, setHorizontalAlignment, setScrollOffset
 
Methods inherited from class javax.swing.text.JTextComponent
addCaretListener, addInputMethodListener, addKeymap, copy, cut, fireCaretUpdate, getCaret, getCaretColor, getCaretListeners, getCaretPosition, getDisabledTextColor, getDocument, getDragEnabled, getDropLocation, getDropMode, getFocusAccelerator, getHighlighter, getInputMethodRequests, getKeymap, getKeymap, getMargin, getNavigationFilter, getPreferredScrollableViewportSize, getPrintable, getScrollableBlockIncrement, getScrollableTracksViewportHeight, getScrollableTracksViewportWidth, getScrollableUnitIncrement, getSelectedText, getSelectedTextColor, getSelectionColor, getSelectionEnd, getSelectionStart, getText, getText, getToolTipText, getUI, isEditable, loadKeymap, modelToView, moveCaretPosition, paste, print, print, print, processInputMethodEvent, read, removeCaretListener, removeKeymap, removeNotify, replaceSelection, select, selectAll, setCaret, setCaretColor, setCaretPosition, setComponentOrientation, setDisabledTextColor, setDragEnabled, setDropMode, setEditable, setFocusAccelerator, setHighlighter, setKeymap, setMargin, setNavigationFilter, setSelectedTextColor, setSelectionColor, setSelectionEnd, setSelectionStart, setText, setUI, updateUI, viewToModel, write
 
Methods inherited from class javax.swing.JComponent
addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingTile, isRequestFocusEnabled, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update
 
Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusDownCycle, validate, validateTree
 
Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

StatusDisplay

public StatusDisplay()
Method Detail

destroy

public void destroy()

mouseOverPosition

public void mouseOverPosition(AlignedPosition p)
Specified by:
mouseOverPosition in interface AlignmentPositionListener

positionSelected

public void positionSelected(AlignedPosition p)
Specified by:
positionSelected in interface AlignmentPositionListener

toggleSelection

public void toggleSelection(AlignedPosition p)
Specified by:
toggleSelection in interface AlignmentPositionListener

rangeSelected

public void rangeSelected(AlignedPosition start,
                          AlignedPosition end)
Specified by:
rangeSelected in interface AlignmentPositionListener

selectionLocked

public void selectionLocked()
Specified by:
selectionLocked in interface AlignmentPositionListener

selectionUnlocked

public void selectionUnlocked()
Specified by:
selectionUnlocked in interface AlignmentPositionListener

getAfpChain

public AFPChain getAfpChain()

setAfpChain

public void setAfpChain(AFPChain afpChain)

getCa1

public Atom[] getCa1()

setCa1

public void setCa1(Atom[] ca1)

getCa2

public Atom[] getCa2()

setCa2

public void setCa2(Atom[] ca2)

windowActivated

public void windowActivated(WindowEvent e)
Specified by:
windowActivated in interface WindowListener

windowClosed

public void windowClosed(WindowEvent e)
Specified by:
windowClosed in interface WindowListener

windowClosing

public void windowClosing(WindowEvent e)
Specified by:
windowClosing in interface WindowListener

windowDeactivated

public void windowDeactivated(WindowEvent e)
Specified by:
windowDeactivated in interface WindowListener

windowDeiconified

public void windowDeiconified(WindowEvent e)
Specified by:
windowDeiconified in interface WindowListener

windowIconified

public void windowIconified(WindowEvent e)
Specified by:
windowIconified in interface WindowListener

windowOpened

public void windowOpened(WindowEvent e)
Specified by:
windowOpened in interface WindowListener