org.biojava.bio.structure.io.mmcif.model
Class ChemComp
java.lang.Object
org.biojava.bio.structure.io.mmcif.model.ChemComp
- All Implemented Interfaces:
- Serializable, Comparable<ChemComp>
public class ChemComp
- extends Object
- implements Serializable, Comparable<ChemComp>
A definition for a Chemical Component, as maintained by the wwPDB. For access to all definitions,
please download the components.cif.gz file from the wwPDB website.
- Author:
- Andreas Prlic
- See Also:
- Serialized Form
ChemComp
public ChemComp()
toString
public String toString()
- Overrides:
toString
in class Object
hasParent
public boolean hasParent()
isStandard
public boolean isStandard()
getId
public String getId()
setId
public void setId(String id)
getName
public String getName()
setName
public void setName(String name)
getType
public String getType()
setType
public void setType(String type)
getResidueType
public ResidueType getResidueType()
setResidueType
public void setResidueType(ResidueType residueType)
getPolymerType
public PolymerType getPolymerType()
setPolymerType
public void setPolymerType(PolymerType polymerType)
getPdbx_type
public String getPdbx_type()
setPdbx_type
public void setPdbx_type(String pdbx_type)
getFormula
public String getFormula()
setFormula
public void setFormula(String formula)
getMon_nstd_parent_comp_id
public String getMon_nstd_parent_comp_id()
setMon_nstd_parent_comp_id
public void setMon_nstd_parent_comp_id(String mon_nstd_parent_comp_id)
getPdbx_synonyms
public String getPdbx_synonyms()
setPdbx_synonyms
public void setPdbx_synonyms(String pdbx_synonyms)
getPdbx_formal_charge
public String getPdbx_formal_charge()
setPdbx_formal_charge
public void setPdbx_formal_charge(String pdbx_formal_charge)
getPdbx_initial_date
public String getPdbx_initial_date()
setPdbx_initial_date
public void setPdbx_initial_date(String pdbx_initial_date)
getPdbx_modified_date
public String getPdbx_modified_date()
setPdbx_modified_date
public void setPdbx_modified_date(String pdbx_modified_date)
getPdbx_ambiguous_flag
public String getPdbx_ambiguous_flag()
setPdbx_ambiguous_flag
public void setPdbx_ambiguous_flag(String pdbx_ambiguous_flag)
getPdbx_release_status
public String getPdbx_release_status()
setPdbx_release_status
public void setPdbx_release_status(String pdbx_release_status)
getPdbx_replaced_by
public String getPdbx_replaced_by()
setPdbx_replaced_by
public void setPdbx_replaced_by(String pdbx_replaced_by)
getPdbx_replaces
public String getPdbx_replaces()
setPdbx_replaces
public void setPdbx_replaces(String pdbx_replaces)
getFormula_weight
public String getFormula_weight()
setFormula_weight
public void setFormula_weight(String formula_weight)
getOne_letter_code
public String getOne_letter_code()
setOne_letter_code
public void setOne_letter_code(String one_letter_code)
getThree_letter_code
public String getThree_letter_code()
setThree_letter_code
public void setThree_letter_code(String three_letter_code)
getPdbx_model_coordinates_details
public String getPdbx_model_coordinates_details()
setPdbx_model_coordinates_details
public void setPdbx_model_coordinates_details(String pdbx_model_coordinates_details)
getPdbx_model_coordinates_missing_flag
public String getPdbx_model_coordinates_missing_flag()
setPdbx_model_coordinates_missing_flag
public void setPdbx_model_coordinates_missing_flag(String pdbx_model_coordinates_missing_flag)
getPdbx_ideal_coordinates_details
public String getPdbx_ideal_coordinates_details()
setPdbx_ideal_coordinates_details
public void setPdbx_ideal_coordinates_details(String pdbx_ideal_coordinates_details)
getPdbx_ideal_coordinates_missing_flag
public String getPdbx_ideal_coordinates_missing_flag()
setPdbx_ideal_coordinates_missing_flag
public void setPdbx_ideal_coordinates_missing_flag(String pdbx_ideal_coordinates_missing_flag)
getPdbx_model_coordinates_db_code
public String getPdbx_model_coordinates_db_code()
setPdbx_model_coordinates_db_code
public void setPdbx_model_coordinates_db_code(String pdbx_model_coordinates_db_code)
getPdbx_subcomponent_list
public String getPdbx_subcomponent_list()
setPdbx_subcomponent_list
public void setPdbx_subcomponent_list(String pdbx_subcomponent_list)
getPdbx_processing_site
public String getPdbx_processing_site()
setPdbx_processing_site
public void setPdbx_processing_site(String pdbx_processing_site)
setStandard
public void setStandard(boolean standard)
getMon_nstd_flag
public String getMon_nstd_flag()
setMon_nstd_flag
public void setMon_nstd_flag(String mon_nstd_flag)
getDescriptors
public List<ChemCompDescriptor> getDescriptors()
setDescriptors
public void setDescriptors(List<ChemCompDescriptor> descriptors)
compareTo
public int compareTo(ChemComp arg0)
- Specified by:
compareTo
in interface Comparable<ChemComp>
hashCode
public int hashCode()
- Overrides:
hashCode
in class Object
equals
public boolean equals(Object obj)
- Overrides:
equals
in class Object