org.biojava3.ronn
Class RonnConstraint

java.lang.Object
  extended by org.biojava3.ronn.RonnConstraint

public final class RonnConstraint
extends Object

A collection of various constrain values used by RONN

Since:
3.0.2
Version:
1.0
Author:
Peter Troshin

Nested Class Summary
static class RonnConstraint.Threshold
           
 
Field Summary
static short[][] Blosum62
           
static float DEFAULT_DISORDER
           
static float DEFAULT_ORDER
           
static float DEFAULT_RANGE_PROBABILITY_THRESHOLD
           
static short[] INDEX
           
 
Constructor Summary
RonnConstraint()
           
 
Method Summary
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

DEFAULT_DISORDER

public static final float DEFAULT_DISORDER
See Also:
Constant Field Values

DEFAULT_ORDER

public static final float DEFAULT_ORDER
See Also:
Constant Field Values

DEFAULT_RANGE_PROBABILITY_THRESHOLD

public static final float DEFAULT_RANGE_PROBABILITY_THRESHOLD
See Also:
Constant Field Values

INDEX

public static final short[] INDEX

Blosum62

public static final short[][] Blosum62
Constructor Detail

RonnConstraint

public RonnConstraint()