org.biojava3.alignment.template
Class CallableProfileProfileAligner<S extends Sequence<C>,C extends Compound>
java.lang.Object
org.biojava3.alignment.template.CallableProfileProfileAligner<S,C>
- Type Parameters:
S
- each Sequence
of the Profile
pair is of type SC
- each element of an AlignedSequence
is a Compound
of type C
- All Implemented Interfaces:
- Callable<ProfilePair<S,C>>
public class CallableProfileProfileAligner<S extends Sequence<C>,C extends Compound>
- extends Object
- implements Callable<ProfilePair<S,C>>
Implements a concurrency wrapper for a ProfileProfileAligner
.
- Author:
- Mark Chapman
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
CallableProfileProfileAligner
public CallableProfileProfileAligner(ProfileProfileAligner<S,C> ppa)
- Creates a profile-profile alignment task for simplified parallel execution.
- Parameters:
ppa
- already initialized profile-profile aligner
call
public ProfilePair<S,C> call()
- Specified by:
call
in interface Callable<ProfilePair<S extends Sequence<C>,C extends Compound>>