org.biojava.bio.structure.scop.server
Class XMLUtil

java.lang.Object
  extended by org.biojava.bio.structure.scop.server.XMLUtil

public class XMLUtil
extends Object

Utility classes for the XML serialization and de-serialization of SCOP.

Since:
3.0.2
Author:
Andreas Prlic

Constructor Summary
XMLUtil()
           
 
Method Summary
static SortedSet<String> getDomainRangesFromXML(String xml)
           
static String getDomainRangesXML(SortedSet<String> domainRanges)
           
static SortedSet<Domain> getDomainsFromXML(String xml)
           
static String getDomainsXML(SortedSet<Domain> domains)
           
static ScopDescription getScopDescriptionFromXML(String xml)
           
static String getScopDescriptionsXML(List<ScopDescription> descriptions)
           
static String getScopDescriptionXML(ScopDescription desc)
           
static ScopDomain getScopDomainFromXML(String xml)
           
static String getScopDomainsXML(List<ScopDomain> domains)
           
static String getScopDomainXML(ScopDomain domain)
           
static ScopNode getScopNodeFromXML(String xml)
           
static String getScopNodesXML(List<ScopNode> nodes)
           
static String getScopNodeXML(ScopNode scopNode)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

XMLUtil

public XMLUtil()
Method Detail

getScopDescriptionXML

public static String getScopDescriptionXML(ScopDescription desc)

getScopDescriptionFromXML

public static ScopDescription getScopDescriptionFromXML(String xml)

getScopDescriptionsXML

public static String getScopDescriptionsXML(List<ScopDescription> descriptions)

getScopNodeXML

public static String getScopNodeXML(ScopNode scopNode)

getScopNodeFromXML

public static ScopNode getScopNodeFromXML(String xml)

getScopNodesXML

public static String getScopNodesXML(List<ScopNode> nodes)

getScopDomainXML

public static String getScopDomainXML(ScopDomain domain)

getScopDomainFromXML

public static ScopDomain getScopDomainFromXML(String xml)

getScopDomainsXML

public static String getScopDomainsXML(List<ScopDomain> domains)

getDomainsXML

public static String getDomainsXML(SortedSet<Domain> domains)

getDomainsFromXML

public static SortedSet<Domain> getDomainsFromXML(String xml)

getDomainRangesXML

public static String getDomainRangesXML(SortedSet<String> domainRanges)

getDomainRangesFromXML

public static SortedSet<String> getDomainRangesFromXML(String xml)