org.biojava.bio.structure.align.ce
Class CeCPMain.CPRange

java.lang.Object
  extended by org.biojava.bio.structure.align.ce.CeCPMain.CPRange
Enclosing class:
CeCPMain

protected static class CeCPMain.CPRange
extends Object

Tiny wrapper for the disallowed regions of an alignment.

Author:
Spencer Bliven
See Also:
CeCPMain.calculateMinCP(int[], int, int, int)

Field Summary
 int c
          first allowed c-term
 int mid
          midpoint of the alignment
 int n
          last allowed n-term
 
Constructor Summary
protected CeCPMain.CPRange()
           
 
Method Summary
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

n

public int n
last allowed n-term


mid

public int mid
midpoint of the alignment


c

public int c
first allowed c-term

Constructor Detail

CeCPMain.CPRange

protected CeCPMain.CPRange()