org.biojava3.core.sequence.compound
Class RNACompoundSet

java.lang.Object
  extended by org.biojava3.core.sequence.template.AbstractCompoundSet<C>
      extended by org.biojava3.core.sequence.template.AbstractNucleotideCompoundSet<NucleotideCompound>
          extended by org.biojava3.core.sequence.compound.RNACompoundSet
All Implemented Interfaces:
CompoundSet<NucleotideCompound>
Direct Known Subclasses:
AmbiguityRNACompoundSet

public class RNACompoundSet
extends AbstractNucleotideCompoundSet<NucleotideCompound>

Author:
Andy Yates

Constructor Summary
RNACompoundSet()
           
 
Method Summary
static RNACompoundSet getRNACompoundSet()
           
 NucleotideCompound newNucleotideCompound(String base, String complement, String... equivalents)
           
 
Methods inherited from class org.biojava3.core.sequence.template.AbstractNucleotideCompoundSet
addNucleotideCompound, calculateIndirectAmbiguities, getAmbiguity, isComplementable
 
Methods inherited from class org.biojava3.core.sequence.template.AbstractCompoundSet
addCompound, addCompound, addCompound, addEquivalent, compoundsEqual, compoundsEquivalent, equals, getAllCompounds, getCompoundForString, getEquivalentCompounds, getMaxSingleCompoundStringLength, getStringForCompound, hasCompound, hashCode, isCompoundStringLengthEqual, verifySequence
 
Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

RNACompoundSet

public RNACompoundSet()
Method Detail

getRNACompoundSet

public static RNACompoundSet getRNACompoundSet()

newNucleotideCompound

public NucleotideCompound newNucleotideCompound(String base,
                                                String complement,
                                                String... equivalents)
Specified by:
newNucleotideCompound in class AbstractNucleotideCompoundSet<NucleotideCompound>