org.biojava3.protmod
Interface ProteinModification
- All Known Implementing Classes:
- ProteinModificationImpl
public interface ProteinModification
This interface defines information about a specific protein
modification.
- Since:
- 3.0
- Author:
- Jianjiong Gao
getId
String getId()
- Returns:
- modification id.
getPdbccId
String getPdbccId()
- Returns:
- Protein Data Bank Chemical Component ID.
getPdbccName
String getPdbccName()
- Returns:
- Protein Data Bank Chemical Component name.
getResidId
String getResidId()
- Returns:
- RESID ID.
getResidName
String getResidName()
- Returns:
- RESID name.
getPsimodId
String getPsimodId()
- Returns:
- PSI-MOD ID.
getPsimodName
String getPsimodName()
- Returns:
- PSI-MOD name.
getSystematicName
String getSystematicName()
- Returns:
- Systematic name.
getDescription
String getDescription()
- Returns:
- Description.
getKeywords
Set<String> getKeywords()
- Returns:
- a set of keywords.
getCondition
ModificationCondition getCondition()
- Returns:
ModificationCondition
getFormula
String getFormula()
- Returns:
- formula of the modified residue.
getCategory
ModificationCategory getCategory()
- Returns:
- the modification category.
getOccurrenceType
ModificationOccurrenceType getOccurrenceType()
- Returns:
- the modification occurrence type.