Package org.biojava.bio.structure.io.mmcif

Input and Output of mmcif files

See:
          Description

Interface Summary
ChemCompProvider Interface that is implemented by all classes that can provide ChemComp definitions.
MMcifConsumer An interface for the events triggered by a MMcifParser.
MMcifParser Interface that needs to be implemented by an MMcifParser
 

Class Summary
AllChemCompProvider A ChemComp provider that downloads and caches the components.cif file from the wwPDB site.
ChemCompConsumer  
ChemCompGroupFactory  
ChemicalComponentDictionary A representation of the Chemical Component Dictionary.
DownloadChemCompProvider This provider of chemical components can download and cache chemical component definition files from the RCSB PDB web site.
ReducedChemCompProvider Unlike the DownloadChemCompProvider, this ChemCompProvider does not download any chem comp definitions.
SimpleMMcifConsumer A MMcifConsumer implementation that build a in-memory representation of the content of a mmcif file as a BioJava Structure object.
SimpleMMcifParser A simple mmCif file parser
 

Package org.biojava.bio.structure.io.mmcif Description

Input and Output of mmcif files