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java.lang.Objectorg.forester.phylogeny.data.PropertiesMap
public class PropertiesMap
Constructor Summary | |
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PropertiesMap()
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Method Summary | |
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void |
addProperty(Property property)
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StringBuffer |
asSimpleText()
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StringBuffer |
asText()
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PhylogenyData |
copy()
Creates a new PhylogenyData object with identical values as this PhylogenyData. |
SortedMap<String,Property> |
getProperties()
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Property[] |
getPropertiesArray()
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Property |
getProperty(String ref)
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String[] |
getPropertyRefs()
Returns all property refs of this PhylogenyNode as String array. |
boolean |
isEqual(PhylogenyData data)
Compares this PhylogenyData to PhylogenyData data. |
boolean |
refExists(String ref)
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StringBuffer |
toNHX()
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void |
toPhyloXML(Writer writer,
int level,
String indentation)
Writes a phyloXML representation of this phylogeny data. |
String |
toString()
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Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public PropertiesMap()
Method Detail |
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public void addProperty(Property property) throws IllegalArgumentException
IllegalArgumentException
public StringBuffer asSimpleText()
asSimpleText
in interface PhylogenyData
public StringBuffer asText()
asText
in interface PhylogenyData
public PhylogenyData copy()
PhylogenyData
copy
in interface PhylogenyData
public SortedMap<String,Property> getProperties()
public Property[] getPropertiesArray()
public Property getProperty(String ref) throws IllegalArgumentException
IllegalArgumentException
public String[] getPropertyRefs()
public boolean isEqual(PhylogenyData data)
PhylogenyData
isEqual
in interface PhylogenyData
public boolean refExists(String ref)
public StringBuffer toNHX()
toNHX
in interface PhylogenyData
public void toPhyloXML(Writer writer, int level, String indentation) throws IOException
PhylogenyData
toPhyloXML
in interface PhylogenyData
IOException
public String toString()
toString
in class Object
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