org.forester.io.parsers.phyloxml
Class PhyloXmlMapping
java.lang.Object
org.forester.io.parsers.phyloxml.PhyloXmlMapping
public final class PhyloXmlMapping
- extends Object
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
PHYLOGENY
public static final String PHYLOGENY
- See Also:
- Constant Field Values
PHYLOGENY_NAME
public static final String PHYLOGENY_NAME
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- Constant Field Values
PHYLOGENY_DESCRIPTION
public static final String PHYLOGENY_DESCRIPTION
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- Constant Field Values
PHYLOGENY_IS_REROOTABLE_ATTR
public static final String PHYLOGENY_IS_REROOTABLE_ATTR
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- Constant Field Values
PHYLOGENY_BRANCHLENGTH_UNIT_ATTR
public static final String PHYLOGENY_BRANCHLENGTH_UNIT_ATTR
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- Constant Field Values
PHYLOGENY_IS_ROOTED_ATTR
public static final String PHYLOGENY_IS_ROOTED_ATTR
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- Constant Field Values
PHYLOGENY_TYPE_ATTR
public static final String PHYLOGENY_TYPE_ATTR
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- Constant Field Values
CLADE
public static final String CLADE
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- Constant Field Values
NODE_NAME
public static final String NODE_NAME
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- Constant Field Values
SEQUENCE
public static final String SEQUENCE
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- Constant Field Values
SEQUENCE_NAME
public static final String SEQUENCE_NAME
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- Constant Field Values
SEQUENCE_SYMBOL
public static final String SEQUENCE_SYMBOL
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- Constant Field Values
ACCESSION
public static final String ACCESSION
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- Constant Field Values
ACCESSION_SOURCE_ATTR
public static final String ACCESSION_SOURCE_ATTR
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- Constant Field Values
SEQUENCE_LOCATION
public static final String SEQUENCE_LOCATION
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- Constant Field Values
SEQUENCE_MOL_SEQ
public static final String SEQUENCE_MOL_SEQ
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- Constant Field Values
ANNOTATION
public static final String ANNOTATION
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- Constant Field Values
ANNOTATION_DESC
public static final String ANNOTATION_DESC
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- Constant Field Values
ANNOTATION_REF_ATTR
public static final String ANNOTATION_REF_ATTR
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- Constant Field Values
ANNOTATION_EVIDENCE_ATTR
public static final String ANNOTATION_EVIDENCE_ATTR
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- Constant Field Values
ANNOTATION_TYPE_ATTR
public static final String ANNOTATION_TYPE_ATTR
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- Constant Field Values
TAXONOMY
public static final String TAXONOMY
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- Constant Field Values
TAXONOMY_SCIENTIFIC_NAME
public static final String TAXONOMY_SCIENTIFIC_NAME
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- Constant Field Values
TAXONOMY_COMMON_NAME
public static final String TAXONOMY_COMMON_NAME
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- Constant Field Values
TAXONOMY_CODE
public static final String TAXONOMY_CODE
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- Constant Field Values
TAXONOMY_RANK
public static final String TAXONOMY_RANK
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- Constant Field Values
TAXONOMY_SYNONYM
public static final String TAXONOMY_SYNONYM
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- Constant Field Values
TAXONOMY_AUTHORITY
public static final String TAXONOMY_AUTHORITY
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- Constant Field Values
DISTRIBUTION
public static final String DISTRIBUTION
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- Constant Field Values
BINARY_CHARACTERS
public static final String BINARY_CHARACTERS
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- Constant Field Values
BINARY_CHARACTERS_PRESENT
public static final String BINARY_CHARACTERS_PRESENT
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- Constant Field Values
BINARY_CHARACTERS_GAINED
public static final String BINARY_CHARACTERS_GAINED
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- Constant Field Values
BINARY_CHARACTERS_LOST
public static final String BINARY_CHARACTERS_LOST
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- Constant Field Values
BINARY_CHARACTERS_TYPE_ATTR
public static final String BINARY_CHARACTERS_TYPE_ATTR
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- Constant Field Values
BINARY_CHARACTERS_PRESENT_COUNT_ATTR
public static final String BINARY_CHARACTERS_PRESENT_COUNT_ATTR
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- Constant Field Values
BINARY_CHARACTERS_GAINED_COUNT_ATTR
public static final String BINARY_CHARACTERS_GAINED_COUNT_ATTR
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- Constant Field Values
BINARY_CHARACTERS_LOST_COUNT_ATTR
public static final String BINARY_CHARACTERS_LOST_COUNT_ATTR
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- Constant Field Values
BRANCH_LENGTH
public static final String BRANCH_LENGTH
- See Also:
- Constant Field Values
CONFIDENCE
public static final String CONFIDENCE
- See Also:
- Constant Field Values
CONFIDENCE_TYPE_ATTR
public static final String CONFIDENCE_TYPE_ATTR
- See Also:
- Constant Field Values
COLOR
public static final String COLOR
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- Constant Field Values
COLOR_RED
public static final String COLOR_RED
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- Constant Field Values
COLOR_GREEN
public static final String COLOR_GREEN
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- Constant Field Values
COLOR_BLUE
public static final String COLOR_BLUE
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- Constant Field Values
SEQUENCE_DOMAIN_ARCHITECTURE_DOMAIN
public static final String SEQUENCE_DOMAIN_ARCHITECTURE_DOMAIN
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- Constant Field Values
SEQUENCE_DOMAIN_ARCHITECTURE_PROT_DOMAIN_FROM
public static final String SEQUENCE_DOMAIN_ARCHITECTURE_PROT_DOMAIN_FROM
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- Constant Field Values
SEQUENCE_DOMAIN_ARCHITECTURE_PROT_DOMAIN_TO
public static final String SEQUENCE_DOMAIN_ARCHITECTURE_PROT_DOMAIN_TO
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- Constant Field Values
SEQUENCE_DOMAIN_ARCHITECTURE_PROT_DOMAIN_CONFIDENCE
public static final String SEQUENCE_DOMAIN_ARCHITECTURE_PROT_DOMAIN_CONFIDENCE
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- Constant Field Values
IDENTIFIER
public static final String IDENTIFIER
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- Constant Field Values
IDENTIFIER_PROVIDER_ATTR
public static final String IDENTIFIER_PROVIDER_ATTR
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- Constant Field Values
URI
public static final String URI
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- Constant Field Values
WIDTH
public static final String WIDTH
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- Constant Field Values
EVENTS
public static final String EVENTS
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- Constant Field Values
EVENT_TYPE
public static final String EVENT_TYPE
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- Constant Field Values
EVENT_DUPLICATIONS
public static final String EVENT_DUPLICATIONS
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- Constant Field Values
EVENT_SPECIATIONS
public static final String EVENT_SPECIATIONS
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- Constant Field Values
EVENT_LOSSES
public static final String EVENT_LOSSES
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- Constant Field Values
SEQUENCE_DOMAIN_ARCHITECURE
public static final String SEQUENCE_DOMAIN_ARCHITECURE
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- Constant Field Values
SEQUENCE_DOMAIN_ARCHITECTURE_LENGTH
public static final String SEQUENCE_DOMAIN_ARCHITECTURE_LENGTH
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- Constant Field Values
SEQUENCE_TYPE
public static final String SEQUENCE_TYPE
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- Constant Field Values
BINARY_CHARACTER
public static final String BINARY_CHARACTER
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- Constant Field Values
URI_DESC_ATTR
public static final String URI_DESC_ATTR
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- Constant Field Values
TYPE_ATTR
public static final String TYPE_ATTR
- See Also:
- Constant Field Values
REFERENCE
public static final String REFERENCE
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- Constant Field Values
REFERENCE_DOI_ATTR
public static final String REFERENCE_DOI_ATTR
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- Constant Field Values
REFERENCE_DESC
public static final String REFERENCE_DESC
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- Constant Field Values
PROPERTY
public static final String PROPERTY
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- Constant Field Values
PROPERTY_REF
public static final String PROPERTY_REF
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- Constant Field Values
PROPERTY_UNIT
public static final String PROPERTY_UNIT
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- Constant Field Values
PROPERTY_DATATYPE
public static final String PROPERTY_DATATYPE
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- Constant Field Values
PROPERTY_APPLIES_TO
public static final String PROPERTY_APPLIES_TO
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- Constant Field Values
ID_REF
public static final String ID_REF
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- Constant Field Values
ANNOTATION_SOURCE_ATTR
public static final String ANNOTATION_SOURCE_ATTR
- See Also:
- Constant Field Values
DISTRIBUTION_DESC
public static final String DISTRIBUTION_DESC
- See Also:
- Constant Field Values
POINT
public static final String POINT
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- Constant Field Values
POINT_LONGITUDE
public static final String POINT_LONGITUDE
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- Constant Field Values
POINT_LATITUDE
public static final String POINT_LATITUDE
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- Constant Field Values
POINT_ALTITUDE
public static final String POINT_ALTITUDE
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- Constant Field Values
POINT_ALTITUDE_UNIT_ATTR
public static final String POINT_ALTITUDE_UNIT_ATTR
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- Constant Field Values
POINT_GEODETIC_DATUM
public static final String POINT_GEODETIC_DATUM
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- Constant Field Values
CLADE_DATE
public static final String CLADE_DATE
- See Also:
- Constant Field Values
CLADE_DATE_UNIT
public static final String CLADE_DATE_UNIT
- See Also:
- Constant Field Values
CLADE_DATE_DESC
public static final String CLADE_DATE_DESC
- See Also:
- Constant Field Values
CLADE_DATE_MIN
public static final String CLADE_DATE_MIN
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- Constant Field Values
CLADE_DATE_MAX
public static final String CLADE_DATE_MAX
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- Constant Field Values
CLADE_DATE_VALUE
public static final String CLADE_DATE_VALUE
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- Constant Field Values