org.biojava3.ws.alignment.qblast
Enum BlastOutputAlignmentFormatEnum
java.lang.Object
java.lang.Enum<BlastOutputAlignmentFormatEnum>
org.biojava3.ws.alignment.qblast.BlastOutputAlignmentFormatEnum
- All Implemented Interfaces:
- Serializable, Comparable<BlastOutputAlignmentFormatEnum>
public enum BlastOutputAlignmentFormatEnum
- extends Enum<BlastOutputAlignmentFormatEnum>
Enum representing available output alignment types.
Values as used in QBlast URL API.
- Author:
- Gediminas Rimsa
Pairwise
public static final BlastOutputAlignmentFormatEnum Pairwise
QueryAnchored
public static final BlastOutputAlignmentFormatEnum QueryAnchored
QueryAnchoredNoIdentities
public static final BlastOutputAlignmentFormatEnum QueryAnchoredNoIdentities
FlatQueryAnchored
public static final BlastOutputAlignmentFormatEnum FlatQueryAnchored
FlatQueryAnchoredNoIdentities
public static final BlastOutputAlignmentFormatEnum FlatQueryAnchoredNoIdentities
Tabular
public static final BlastOutputAlignmentFormatEnum Tabular
values
public static BlastOutputAlignmentFormatEnum[] values()
- Returns an array containing the constants of this enum type, in
the order they are declared. This method may be used to iterate
over the constants as follows:
for (BlastOutputAlignmentFormatEnum c : BlastOutputAlignmentFormatEnum.values())
System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in
the order they are declared
valueOf
public static BlastOutputAlignmentFormatEnum valueOf(String name)
- Returns the enum constant of this type with the specified name.
The string must match exactly an identifier used to declare an
enum constant in this type. (Extraneous whitespace characters are
not permitted.)
- Parameters:
name
- the name of the enum constant to be returned.
- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum type has no constant
with the specified name
NullPointerException
- if the argument is null