|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectorg.biojava3.core.sequence.template.AbstractSequence<NucleotideCompound>
org.biojava3.core.sequence.DNASequence
org.biojava3.core.sequence.StopCodonSequence
public class StopCodonSequence
Used to map the stop codon sequence on a gene
Nested Class Summary |
---|
Nested classes/interfaces inherited from class org.biojava3.core.sequence.DNASequence |
---|
DNASequence.DNAType |
Nested classes/interfaces inherited from class org.biojava3.core.sequence.template.AbstractSequence |
---|
AbstractSequence.AnnotationType |
Field Summary | |
---|---|
DNASequence |
parentGeneSequence
|
Constructor Summary | |
---|---|
StopCodonSequence(TranscriptSequence parentGeneSequence,
int begin,
int end)
|
Method Summary | |
---|---|
int |
getLength()
Returns the length of the Sequence |
Methods inherited from class org.biojava3.core.sequence.DNASequence |
---|
getComplement, getDNAType, getGCCount, getReverse, getReverseComplement, getRNASequence, getRNASequence, getRNASequence, getRNASequence, main, setDNAType |
Methods inherited from class java.lang.Object |
---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
---|
public DNASequence parentGeneSequence
Constructor Detail |
---|
public StopCodonSequence(TranscriptSequence parentGeneSequence, int begin, int end)
Method Detail |
---|
public int getLength()
Sequence
getLength
in interface Sequence<NucleotideCompound>
getLength
in class AbstractSequence<NucleotideCompound>
|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |