org.biojava3.alignment.template
Enum Profile.StringFormat

java.lang.Object
  extended by java.lang.Enum<Profile.StringFormat>
      extended by org.biojava3.alignment.template.Profile.StringFormat
All Implemented Interfaces:
Serializable, Comparable<Profile.StringFormat>
Enclosing interface:
Profile<S extends Sequence<C>,C extends Compound>

public static enum Profile.StringFormat
extends Enum<Profile.StringFormat>

List of output formats.


Enum Constant Summary
ALN
           
CLUSTALW
           
FASTA
           
GCG
           
MSF
           
PDBWEB
           
 
Method Summary
static Profile.StringFormat valueOf(String name)
          Returns the enum constant of this type with the specified name.
static Profile.StringFormat[] values()
          Returns an array containing the constants of this enum type, in the order they are declared.
 
Methods inherited from class java.lang.Enum
clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
 
Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait
 

Enum Constant Detail

ALN

public static final Profile.StringFormat ALN

CLUSTALW

public static final Profile.StringFormat CLUSTALW

FASTA

public static final Profile.StringFormat FASTA

GCG

public static final Profile.StringFormat GCG

MSF

public static final Profile.StringFormat MSF

PDBWEB

public static final Profile.StringFormat PDBWEB
Method Detail

values

public static Profile.StringFormat[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:
for (Profile.StringFormat c : Profile.StringFormat.values())
    System.out.println(c);

Returns:
an array containing the constants of this enum type, in the order they are declared

valueOf

public static Profile.StringFormat valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:
name - the name of the enum constant to be returned.
Returns:
the enum constant with the specified name
Throws:
IllegalArgumentException - if this enum type has no constant with the specified name
NullPointerException - if the argument is null