org.biojava3.core.sequence.template
Interface SequenceView<C extends Compound>

All Superinterfaces:
Accessioned, Iterable<C>, Sequence<C>
All Known Implementing Classes:
ComplementSequenceView, ReversedSequenceView, RnaSequenceView, SequenceProxyView

public interface SequenceView<C extends Compound>
extends Sequence<C>


Method Summary
 Integer getBioEnd()
          1-indexed, inclusive.
 Integer getBioStart()
          1-indexed, inclusive.
 Sequence<C> getViewedSequence()
           
 
Methods inherited from interface org.biojava3.core.sequence.template.Sequence
countCompounds, getAsList, getCompoundAt, getCompoundSet, getIndexOf, getInverse, getLastIndexOf, getLength, getSequenceAsString, getSubSequence
 
Methods inherited from interface java.lang.Iterable
iterator
 
Methods inherited from interface org.biojava3.core.sequence.template.Accessioned
getAccession
 

Method Detail

getViewedSequence

Sequence<C> getViewedSequence()

getBioStart

Integer getBioStart()
1-indexed, inclusive.


getBioEnd

Integer getBioEnd()
1-indexed, inclusive.