Package | Description |
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org.biojava.bio.structure |
Interfaces and classes for protein structure (PDB).
|
org.biojava.bio.structure.server |
classes for easier management of PDB installations
|
Modifier and Type | Method and Description |
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PDBHeader |
Structure.getPDBHeader()
return the header information for this PDB file
|
PDBHeader |
StructureImpl.getPDBHeader() |
Modifier and Type | Method and Description |
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boolean |
PDBHeader.equals(PDBHeader other)
Compare two PDBHeader objects
|
void |
Structure.setPDBHeader(PDBHeader header)
the the header information for this PDB file
|
void |
StructureImpl.setPDBHeader(PDBHeader pdbHeader) |
Modifier and Type | Method and Description |
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PDBHeader |
MMCIFFileInstallation.getPDBHeader(java.lang.String pdbId) |
PDBHeader |
PDBInstallation.getPDBHeader(java.lang.String pdbId)
get the PDB header for a single protein structure
|
PDBHeader |
FlatFileInstallation.getPDBHeader(java.lang.String pdbId) |
Modifier and Type | Method and Description |
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java.util.List<PDBHeader> |
MMCIFFileInstallation.getAll() |
java.util.List<PDBHeader> |
PDBInstallation.getAll()
get all PDBHeaders that pass the added Filters, if no filters have been added returns all available PDBs
|
java.util.List<PDBHeader> |
FlatFileInstallation.getAll() |
Modifier and Type | Method and Description |
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boolean |
PDBFilter.accept(PDBHeader header)
return true if this PDBHeader is passing this filter.
|