Package | Description |
---|---|
org.biojavax |
The Biojava extensions packages, classes that extend the core biojava
functionality
|
org.biojavax.bio.db.biosql |
Interface between biojava and biosql databases
|
Modifier and Type | Class and Description |
---|---|
class |
SimpleNote
Simple implementation of Note.
|
Modifier and Type | Method and Description |
---|---|
Note |
RichAnnotation.getNote(Note note)
Uses the term and rank to lookup a note in this annotation.
|
Note |
SimpleRichAnnotation.getNote(Note note)
Uses the term and rank to lookup a note in this annotation.
|
Note |
EmptyRichAnnotation.getNote(Note note)
Uses the term and rank to lookup a note in this annotation.
|
Note[] |
RichAnnotation.getProperties(java.lang.Object key)
Find all the
Note s with any rank that match the key. |
Note[] |
SimpleRichAnnotation.getProperties(java.lang.Object key)
Deprecated.
|
Note[] |
EmptyRichAnnotation.getProperties(java.lang.Object key)
Find all the
Note s with any rank that match the key. |
Modifier and Type | Method and Description |
---|---|
void |
RichAnnotation.addNote(Note note)
Adds a note to this annotation.
|
void |
SimpleRichAnnotation.addNote(Note note)
Adds a note to this annotation.
|
void |
EmptyRichAnnotation.addNote(Note note)
Adds a note to this annotation.
|
boolean |
RichAnnotation.contains(Note note)
Returns true if the given note exists in this annotation.
|
boolean |
SimpleRichAnnotation.contains(Note note)
Returns true if the given note exists in this annotation.
|
boolean |
EmptyRichAnnotation.contains(Note note)
Returns true if the given note exists in this annotation.
|
Note |
RichAnnotation.getNote(Note note)
Uses the term and rank to lookup a note in this annotation.
|
Note |
SimpleRichAnnotation.getNote(Note note)
Uses the term and rank to lookup a note in this annotation.
|
Note |
EmptyRichAnnotation.getNote(Note note)
Uses the term and rank to lookup a note in this annotation.
|
void |
RichAnnotation.removeNote(Note note)
Removes a note from this annotation.
|
void |
SimpleRichAnnotation.removeNote(Note note)
Removes a note from this annotation.
|
void |
EmptyRichAnnotation.removeNote(Note note)
Removes a note from this annotation.
|
Modifier and Type | Method and Description |
---|---|
Note |
BioSQLFeatureFilter.ByNote.getNote() |
Constructor and Description |
---|
ByNote(Note note) |