public class GenpeptSequenceDB
extends java.lang.Object
Constructor and Description |
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GenpeptSequenceDB() |
Modifier and Type | Method and Description |
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boolean |
checkException() |
boolean |
checkIOException() |
protected java.net.URL |
getAddress(java.lang.String id) |
protected java.net.URL |
getAddress(java.lang.String id,
java.lang.String format) |
protected Alphabet |
getAlphabet() |
java.lang.String |
getName() |
Sequence |
getSequence(java.lang.String id) |
protected SequenceFormat |
getSequenceFormat() |
protected SequenceFormat getSequenceFormat()
protected Alphabet getAlphabet()
protected java.net.URL getAddress(java.lang.String id) throws java.net.MalformedURLException
java.net.MalformedURLException
protected java.net.URL getAddress(java.lang.String id, java.lang.String format) throws java.net.MalformedURLException
java.net.MalformedURLException
public java.lang.String getName()
public Sequence getSequence(java.lang.String id) throws BioException
BioException
public boolean checkIOException()
public boolean checkException()