public static class GFFErrorHandler.SkipRecordErrorHandler extends java.lang.Object implements GFFErrorHandler
GFFErrorHandler.AbortErrorHandler, GFFErrorHandler.SkipRecordErrorHandler
ABORT_PARSING, SKIP_RECORD
Constructor and Description |
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SkipRecordErrorHandler() |
Modifier and Type | Method and Description |
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int |
invalidEnd(java.lang.String token)
The `end' field of the GFF entry was not a valid value.
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int |
invalidFrame(java.lang.String token)
The `frame' field of the GFF entry was not a valid value.
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double |
invalidScore(java.lang.String token)
The `score' field of the GFF entry was not a valid value.
|
int |
invalidStart(java.lang.String token)
The `start' field of the GFF entry was not a valid value.
|
StrandedFeature.Strand |
invalidStrand(java.lang.String token)
The `strand' field of the GFF entry was not a valid value.
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public int invalidStart(java.lang.String token) throws IgnoreRecordException
GFFErrorHandler
invalidStart
in interface GFFErrorHandler
token
- The start token found.IgnoreRecordException
- If this record should be silently skipped.public int invalidEnd(java.lang.String token) throws IgnoreRecordException
GFFErrorHandler
invalidEnd
in interface GFFErrorHandler
token
- The end token found.IgnoreRecordException
- If this record should be silently skipped.public double invalidScore(java.lang.String token) throws IgnoreRecordException
GFFErrorHandler
invalidScore
in interface GFFErrorHandler
token
- The score token found.IgnoreRecordException
- If this record should be silently skipped.public int invalidFrame(java.lang.String token) throws IgnoreRecordException
GFFErrorHandler
invalidFrame
in interface GFFErrorHandler
token
- The frame token found.IgnoreRecordException
- If this record should be silently skipped.public StrandedFeature.Strand invalidStrand(java.lang.String token) throws IgnoreRecordException
GFFErrorHandler
invalidStrand
in interface GFFErrorHandler
token
- The strand token found.IgnoreRecordException
- If this record should be silently skipped.