Note
Click here to download the full example code
Reading files with neo.ioΒΆ
import urllib
import neo
url_repo = 'https://web.gin.g-node.org/NeuralEnsemble/ephy_testing_data/raw/master/'
# Plexon files
distantfile = url_repo + 'plexon/File_plexon_3.plx'
localfile = './File_plexon_3.plx'
urllib.request.urlretrieve(distantfile, localfile)
# create a reader
reader = neo.io.PlexonIO(filename='File_plexon_3.plx')
# read the blocks
blks = reader.read(lazy=False)
print(blks)
# access to segments
for blk in blks:
for seg in blk.segments:
print(seg)
for asig in seg.analogsignals:
print(asig)
for st in seg.spiketrains:
print(st)
# CED Spike2 files
distantfile = url_repo + 'spike2/File_spike2_1.smr'
localfile = './File_spike2_1.smr'
urllib.request.urlretrieve(distantfile, localfile)
# create a reader
reader = neo.io.Spike2IO(filename='File_spike2_1.smr')
# read the block
bl = reader.read(lazy=False)[0]
print(bl)
# access to segments
for seg in bl.segments:
print(seg)
for asig in seg.analogsignals:
print(asig)
for st in seg.spiketrains:
print(st)
Total running time of the script: ( 0 minutes 0.000 seconds)