Package | Description |
---|---|
ij.plugin | |
ij.plugin.frame | |
ij.plugin.tool |
Modifier and Type | Class and Description |
---|---|
class |
AboutBox
This plugin implements the Help/About ImageJ command by opening
the about.jpg in ij.jar, scaling it 400% and adding some text.
|
class |
Animator
This plugin animates stacks.
|
class |
AppearanceOptions
This plugin implements the Edit/Options/Appearance command.
|
class |
ArrowToolOptions
This plugin implements the Edit/Options/Arrow Tool command.
|
class |
AVI_Reader
ImageJ Plugin for reading an AVI file into an image stack
(one slice per video frame)
Restrictions and Notes:
- Only few formats supported:
- uncompressed 8 bit with palette (=LUT)
- uncompressed 8 & 16 bit grayscale
- uncompressed 24 & 32 bit RGB (alpha channel ignored)
- uncompressed 32 bit AYUV (alpha channel ignored)
- various YUV 4:2:2 and 4:2:0 compressed formats (i.e., formats with
full luminance resolution, but reduced chroma resolution
- png or jpeg-encoded individual frames.
|
class |
BatchConverter
This plugin implements the File/ /Convert command,
which converts the images in a folder to a specified format.
|
class |
BatchMeasure
This plugin implements the File/Batch/Measure command,
which measures all the images in a user-specified folder.
|
class |
BatchProcessor
This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands.
|
class |
Binner
This plugin implements the Image/Transform/Bin command.
|
class |
BMP_Reader
This plugin reads BMP files.
|
class |
BMP_Writer
Implements the File/Save As/BMP command.
|
class |
BrowserLauncher
This plugin implements the File/Import/URL command and the commands in the Help menu that
open web pages.
|
class |
CalibrationBar
This plugin implements the Analyze/Tools/Calibration Bar command.
|
class |
CanvasResizer
This plugin implements the Image/Adjust/Canvas Size command.
|
class |
ChannelArranger
This plugin implements the Image/Colors/Arrange Channels command,
which allows the user to change the order of channels.
|
class |
ChannelSplitter
This plugin implements the Image/Color/Split Channels command.
|
class |
CircularRoiMaker
This class implements the Process/FFT/Make Circular Selection command.
|
class |
ClassChecker
Checks for duplicate class and JAR files in the plugins folders and deletes older duplicates.
|
class |
Clipboard
Copies/pastes images to/from the system clipboard.
|
class |
Colors
This plugin implements most of the Edit/Options/Colors command.
|
class |
CommandFinder |
class |
CommandLister
This class is used by the Plugins/Shortcuts/List Shortcuts
command to display a list keyboard shortcuts.
|
class |
Commands
Runs miscellaneous File and Window menu commands.
|
class |
Compiler
Compiles and runs plugins using the javac compiler.
|
class |
CompositeConverter
This plugin implements the Image/Color/Make Composite command.
|
class |
Concatenator
This plugin, which concatenates two or more images or stacks,
implements the Image/Stacks/Tools/Concatenate command.
|
class |
ContrastEnhancer
Implements ImageJ's Process/Enhance Contrast command.
|
class |
ControlPanel
ControlPanel.
|
class |
Converter
Implements the conversion commands in the Image/Type submenu.
|
class |
Coordinates
The plugin implements the Image/Adjust/Coordinates command.
|
class |
DICOM
This plugin decodes DICOM files.
|
class |
Distribution
This plugin implements the Analyze/Distribution command.
|
class |
DragAndDrop
This class opens images, roi's, luts and text files dragged and dropped on the "ImageJ" window.
|
class |
Duplicator
This plugin implements the Image/Duplicate command.
|
class |
EventListener
This plugin implements the Plugins/Utilities/Monitor Events command.
|
class |
FFT
This class implements the FFT, Inverse FFT and Redisplay Power Spectrum commands
in the Process/FFT submenu.
|
class |
FFTMath
The class implements the Process/FFT/Math command.
|
class |
FileInfoVirtualStack
This plugin opens a multi-page TIFF file as a virtual stack.
|
class |
Filters3D |
class |
FITS_Reader
Opens and displays FITS images.
|
class |
FITS_Writer
This plugin saves a 16 or 32 bit image in FITS format.
|
class |
FolderOpener
Implements the File/Import/Image Sequence command, which
opens a folder of images as a stack.
|
class |
GaussianBlur3D |
class |
GelAnalyzer
This plugin generates gel profile plots that can be analyzed using
the wand tool.
|
class |
GIF_Reader
This plugin opens GIFs and Animated GIFs.
|
class |
GifWriter
Writes a stack as an animated Gif
|
class |
Grid
This class implements the Analyze/Tools/Grid command.
|
class |
GroupedZProjector
This plugin implements the Image/Stacks/Tools/Grouped Z Project command.
|
class |
Histogram
This plugin implements the Analyze/Histogram command.
|
class |
Hotkeys
Implements the Plugins/Hotkeys/Create Shortcut and Remove commands.
|
class |
HyperStackConverter
Implements the "Stack to HyperStack", "RGB to HyperStack"
and "HyperStack to Stack" commands.
|
class |
HyperStackMaker
This plugin implements the File/New/Hyperstack command.
|
class |
HyperStackReducer
Implements the Image/HyperStacks/Reduce Dimensionality command.
|
class |
ImageCalculator
This plugin implements the Process/Image Calculator command.
|
class |
ImageInfo
This plugin implements the Image/Show Info command.
|
class |
ImageJ_Updater
This plugin implements the Help/Update ImageJ command.
|
class |
ImagesToStack
Implements the Image/Stacks/Images to Stack" command.
|
class |
JavaProperties
Displays the Java system properties in a text window.
|
class |
JavaScriptEvaluator
Implements the macro editor's Macros/Evaluate JavaScript command
on systems running Java 1.6 or later.
|
class |
JpegWriter
The File/Save As/Jpeg command (FileSaver.saveAsJpeg() method)
uses this plugin to save images in JPEG format.
|
class |
ListVirtualStack
This plugin opens images specified by list of file paths as a virtual stack.
|
class |
LUT_Editor |
class |
LutLoader
Opens NIH Image look-up tables (LUTs), 768 byte binary LUTs
(256 reds, 256 greens and 256 blues), LUTs in text format,
or generates the LUT specified by the string argument
passed to the run() method.
|
class |
Macro_Runner
This class runs macros and scripts installed in the Plugins menu as well as
macros and scripts opened using the Plugins/Macros/Run command.
|
class |
MacroInstaller
This plugin implements the Plugins/Macros/Install Macros command.
|
class |
MeasurementsWriter
Writes measurements to a csv or tab-delimited text file.
|
class |
Memory
This plugin implements the Edit/Options/Memory command.
|
class |
MontageMaker
Implements the Image/Stacks/Make Montage command.
|
class |
NewPlugin
This class creates a new macro or the Java source for a new plugin.
|
class |
NextImageOpener |
class |
Options
This plugin implements most of the commands
in the Edit/Options sub-menu.
|
class |
Orthogonal_Views
This plugin projects dynamically orthogonal XZ and YZ views of a stack.
|
class |
OverlayCommands
This plugin implements the commands in the Image/Overlay menu.
|
class |
OverlayLabels
This plugin implements the Image/Overlay/Labels command.
|
class |
PGM_Reader
This plugin opens PxM format images.
|
class |
PluginInstaller
Installs plugins dragged and dropped on the "ImageJ" window, or plugins,
macros or scripts opened using the Plugins/Install command.
|
class |
PlugInInterpreter
Plugins that run scripts (e.g., BeanShell, Jython) extend this class.
|
class |
PNG_Writer
Saves in PNG format using the ImageIO classes.
|
class |
PNM_Writer |
class |
PointToolOptions
This plugin implements the Edit/Options/Point Tool command.
|
class |
Profiler
Implements the Analyze/Plot Profile and Edit/Options/Profile Plot Options commands.
|
class |
Projector
This plugin creates a sequence of projections of a rotating volume (stack of slices) onto a plane using
nearest-point (surface), brightest-point, or mean-value projection or a weighted combination of nearest-
point projection with either of the other two methods (partial opacity).
|
class |
ProxySettings
This plugin implements the Plugins/Utilities/Proxy Settings command.
|
class |
Raw
This plugin implements the File/Import/Raw command.
|
class |
RectToolOptions
This plugin implements the rounded rectangle tool dialog box.
|
class |
Resizer
This plugin implements the Edit/Crop and Image/Adjust/Size commands.
|
class |
ResultsSorter
This plugin implements the Results Table's Sort command.
|
class |
RGBStackConverter
Converts a 2 or 3 slice stack, or a hyperstack, to RGB.
|
class |
RGBStackMerge
This plugin implements the Image/Color/Merge Channels command.
|
class |
RoiEnlarger
This plugin, which enlarges or shrinks selections, implements the Edit/Selection/Enlarge command.
|
class |
RoiInterpolator
This class interpolates between ROIs in the ROI Manager.
|
class |
RoiReader
Opens ImageJ, NIH Image and Scion Image for windows ROI outlines.
|
class |
RoiRotator
This plugin implements the Edit/Selection/Rotate command.
|
class |
RoiScaler
This plugin implements the Edit/Selection/Scale command.
|
class |
ScaleBar
This plugin implements the Analyze/Tools/Draw Scale Bar command.
|
class |
Scaler
This plugin implements the Image/Scale command.
|
class |
ScreenGrabber
This plugin implements the Plugins/Utilities/Capture Screen
and Plugins/Utilities/Capture Image commands.
|
class |
Selection
This plugin implements the commands in the Edit/Selection submenu.
|
class |
SimpleCommands
This plugin implements the Plugins/Utilities/Unlock, Image/Rename
and Plugins/Utilities/Search commands.
|
class |
Slicer
Implements the Image/Stacks/Reslice command.
|
class |
SpecifyROI
This plugin implements the Edit/Selection/Specify command.
|
class |
Stack_Statistics
This plugin implements the Image/Stacks/Statistics command.
|
class |
StackCombiner
This plugin implements the Image/Stacks/Combine command.
|
class |
StackEditor
Implements the AddSlice, DeleteSlice and "Stack to Images" commands.
|
class |
StackInserter
This plugin, which implements the Image/Stacks/Tools/Insert
command, inserts an image or stack into another image or stack.
|
class |
StackMaker
The plugin implements the Image/Stacks/Tools/Montage to Stack command.
|
class |
StackPlotter |
class |
StackReducer
This plugin implements the Image/Stacks/Tools/Reduce command.
|
class |
StackReverser
This plugin implements the Image/Transform/Flip Z and
Image/Stacks/Tools/Reverse commands.
|
class |
StackWriter
This plugin, which saves the images in a stack as separate files,
implements the File/Save As/Image Sequence command.
|
class |
Startup
This plugin implements the Edit/Options/Startup command.
|
class |
Straightener
This plugin implements the Edit/Selection/Straighten command.
|
class |
SubHyperstackMaker
This plugin is used by the Image/Stacks/Tools/Make Substack
command to create substacks of hyperstacks.
|
class |
SubstackMaker
This plugin implements the Image/Stacks/Tools/Make Substack command.
|
class |
SurfacePlotter |
class |
Text
This plugin implements the Edit/Options/Fonts command and
the dialog displayed when you double click on the text tool.
|
class |
TextFileReader
This plugin displays the contents of a text file in a window.
|
class |
TextReader
This plugin opens a tab or comma delimeted text file as an image.
|
class |
TextWriter
This plugin implements the File/Save As/Text command, which saves the
contents of Editor windows and TextWindows (e.g., "Log" and "Results").
|
class |
ThreadLister
Displays thread information in a text window.
|
class |
Thresholder
This plugin implements the Process/Binary/Make Binary
and Convert to Mask commands.
|
class |
Timer
ImageJ plugin for measuring the speed of various Java operations.
|
class |
URLOpener
Opens TIFFs, ZIP compressed TIFFs, DICOMs, GIFs and JPEGs using a URL.
|
class |
WandToolOptions
This plugin implements the Edit/Options/Wand Tool command.
|
class |
WindowOrganizer
This class implements the Window menu's "Show All", "Main Window", "Cascade" and "Tile" commands.
|
class |
XY_Reader
This plugin implements the File/Import/XY Coordinates command.
|
class |
XYCoordinates
Writes the XY coordinates and pixel values of all non-background
pixels to a tab-delimited text file.
|
class |
ZAxisProfiler
Implements the Image/Stacks/Plot Z-axis Profile command,
which plots the selection mean gray value versus slice number.
|
class |
Zoom
This plugin implements the commands in the Image/Zoom submenu.
|
class |
ZProjector
This plugin performs a z-projection of the input stack.
|
Modifier and Type | Class and Description |
---|---|
class |
Channels
Displays the ImageJ Channels window.
|
class |
ColorPicker
Implements the Image/Color/Color Picker command.
|
class |
ColorThresholder
Selects pixels according to hsb or rgb components.
|
class |
ContrastAdjuster
This plugin implements the Brightness/Contrast, Window/level and
Color Balance commands, all in the Image/Adjust sub-menu.
|
class |
Editor
This is a simple TextArea based editor for editing and compiling plugins.
|
class |
Fitter
ImageJ plugin that does curve fitting using the modified CurveFitter class.
|
class |
LineWidthAdjuster
Adjusts the width of line selections.
|
class |
MemoryMonitor
This plugin continuously plots ImageJ's memory utilization.
|
class |
PasteController
Implements ImageJ's Paste Control window.
|
class |
PlugInDialog
This is a non-modal dialog that plugins can extend.
|
class |
PlugInFrame
This is a closeable window that plugins can extend.
|
class |
Recorder
This is ImageJ's macro recorder.
|
class |
RoiManager
This plugin implements the Analyze/Tools/ROI Manager command.
|
class |
SyncWindows
This class "synchronizes" mouse input in multiple windows.
|
class |
ThresholdAdjuster
Adjusts the lower and upper threshold levels of the active image.
|
Modifier and Type | Class and Description |
---|---|
class |
ArrowTool |
class |
BrushTool |
class |
MacroToolRunner |
class |
OverlayBrushTool |
class |
PixelInspectionTool
This plugin continuously displays the pixel values of the cursor and
its surroundings.
|
class |
PlugInTool |
class |
RoiRotationTool |