public class PhylogeneticInferrer extends RunnableProcess
Modifier and Type | Class | Description |
---|---|---|
static class |
PhylogeneticInferrer.MSA_PRG |
Modifier and Type | Field | Description |
---|---|---|
static java.lang.String |
MSA_FILE_SUFFIX |
|
static java.lang.String |
PWD_FILE_SUFFIX |
Constructor | Description |
---|---|
PhylogeneticInferrer(java.util.List<MolecularSequence> seqs,
PhylogeneticInferenceOptions options,
MainFrameApplication mf) |
|
PhylogeneticInferrer(Msa msa,
PhylogeneticInferenceOptions options,
MainFrameApplication mf) |
Modifier and Type | Method | Description |
---|---|---|
void |
run() |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
end, start
public static final java.lang.String MSA_FILE_SUFFIX
public static final java.lang.String PWD_FILE_SUFFIX
public PhylogeneticInferrer(java.util.List<MolecularSequence> seqs, PhylogeneticInferenceOptions options, MainFrameApplication mf)
public PhylogeneticInferrer(Msa msa, PhylogeneticInferenceOptions options, MainFrameApplication mf)