SecStrucState
public class SecStrucInfo
extends java.lang.Object
Modifier and Type | Field | Description |
---|---|---|
protected java.lang.String |
assignment |
|
static java.lang.String |
BIOJAVA_ASSIGNMENT |
Secondary strucuture calculated and assigned by DSSP of BioJava
|
static java.lang.String |
DSSP_ASSIGNMENT |
Secondary strucuture parsed from a DSSP output file
|
protected Group |
parent |
|
static java.lang.String |
PDB_AUTHOR_ASSIGNMENT |
Secondary strucuture assigned by the PDB author
|
protected SecStrucType |
type |
Constructor | Description |
---|---|
SecStrucInfo(Group g,
java.lang.String ass,
SecStrucType t) |
Modifier and Type | Method | Description |
---|---|---|
boolean |
equals(java.lang.Object o) |
|
java.lang.String |
getAssignment() |
|
Group |
getGroup() |
|
SecStrucType |
getType() |
|
void |
setType(SecStrucType t) |
|
java.lang.String |
toString() |
public static final java.lang.String PDB_AUTHOR_ASSIGNMENT
public static final java.lang.String DSSP_ASSIGNMENT
public static final java.lang.String BIOJAVA_ASSIGNMENT
protected SecStrucType type
protected java.lang.String assignment
protected Group parent
public SecStrucInfo(Group g, java.lang.String ass, SecStrucType t)
public SecStrucType getType()
public void setType(SecStrucType t)
public java.lang.String getAssignment()
public Group getGroup()
public java.lang.String toString()
toString
in class java.lang.Object
public boolean equals(java.lang.Object o)
equals
in class java.lang.Object