public class ClusterProteinChains
extends java.lang.Object
Constructor | Description |
---|---|
ClusterProteinChains(Structure structure1,
Structure structure2,
QuatSymmetryParameters parameters) |
|
ClusterProteinChains(Structure structure,
QuatSymmetryParameters parameters) |
Modifier and Type | Method | Description |
---|---|---|
int |
getNucleicAcidChainCount() |
|
int |
getProteinChainCount() |
|
java.util.List<SequenceAlignmentCluster> |
getSequenceAlignmentClusters(double sequenceIdentityThreshold) |
Get a non-redundent set of clusters for a given sequence cutoff
|
public ClusterProteinChains(Structure structure, QuatSymmetryParameters parameters)
public ClusterProteinChains(Structure structure1, Structure structure2, QuatSymmetryParameters parameters)
public java.util.List<SequenceAlignmentCluster> getSequenceAlignmentClusters(double sequenceIdentityThreshold)
sequenceIdentityThreshold
- public int getProteinChainCount()
public int getNucleicAcidChainCount()