java.lang.Iterable<S>
, Location
, Accessioned
public class SequenceLocation<S extends AbstractSequence<C>,C extends Compound> extends SimpleLocation
Location.Tools
Constructor | Description |
---|---|
SequenceLocation(int start,
int end,
S sequence) |
|
SequenceLocation(int start,
int end,
S sequence,
Strand strand) |
|
SequenceLocation(int start,
int end,
S sequence,
Strand strand,
boolean circular,
java.util.List<Location> subLocations) |
|
SequenceLocation(Point start,
Point end,
S sequence,
Strand strand) |
Modifier and Type | Method | Description |
---|---|---|
S |
getSequence() |
|
void |
setSequence(S sequence) |
assertLocation, canComplement, equals, getAccession, getEnd, getLength, getRelevantSubLocations, getRelevantSubSequence, getStart, getStrand, getSubLocations, getSubSequence, hashCode, isBetweenCompounds, isCircular, isComplex, isPartial, isPartialOn3prime, isPartialOn5prime, iterator, reverseSequence, setAccession, setBetweenCompounds, setCircular, setEnd, setPartialOn3prime, setPartialOn5prime, setStart, setStrand, setSubLocations, toString