LocalScopDatabase
, ScopDatabase
public class BerkeleyScopInstallation extends ScopInstallation
This provides updates to the MRC SCOP hierarchical classification.
Modifier and Type | Field | Description |
---|---|---|
static java.util.Map<java.lang.String,java.lang.String[]> |
EQUIVALENT_VERSIONS |
A map from SCOP version names which the Berkeley server offers as a
download to an array of equivalent deprecated SCOP version names.
|
claFileName, comFileName, DEFAULT_VERSION, desFileName, FILESPLIT, hieFileName, NEWLINE, SCOP_DOWNLOAD, SCOP_DOWNLOAD_ALTERNATE, scopVersion
Constructor | Description |
---|---|
BerkeleyScopInstallation() |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
addMirror, downloadClaFile, downloadComFile, downloadDesFile, downloadFileFromRemote, downloadHieFile, ensureClaInstalled, ensureComInstalled, ensureDesInstalled, ensureHieInstalled, filterByClassificationId, filterByDescription, filterByDomainName, getByCategory, getCacheLocation, getClaFilename, getComFilename, getComments, getDesFilename, getDomainByScopID, getDomainsForPDB, getHieFilename, getMirrors, getScopDescriptionBySunid, getScopDomainsBySunid, getScopDownloadURL, getScopNode, getScopVersion, getTree, nullifyComments, setCacheLocation, setScopDownloadURL, setScopVersion