ComplementCompound
, Compound
public class NucleotideCompound extends AbstractCompound implements ComplementCompound
Constructor | Description |
---|---|
NucleotideCompound(java.lang.String base,
CompoundSet<NucleotideCompound> compoundSet,
java.lang.String complementStr) |
|
NucleotideCompound(java.lang.String base,
CompoundSet<NucleotideCompound> compoundSet,
java.lang.String complementStr,
NucleotideCompound[] constituents) |
Modifier and Type | Method | Description |
---|---|---|
boolean |
equals(java.lang.Object obj) |
|
boolean |
equalsIgnoreCase(Compound compound) |
|
ComplementCompound |
getComplement() |
|
java.util.Set<NucleotideCompound> |
getConsituents() |
Deprecated.
replaced with
getConstituents() due to typographical error |
java.util.Set<NucleotideCompound> |
getConstituents() |
|
java.lang.String |
getShortName() |
|
int |
hashCode() |
|
boolean |
isAmbiguous() |
getBase, getDescription, getLongName, getMolecularWeight, getUpperedBase, setDescription, setLongName, setMolecularWeight, setShortName, toString
getDescription, getLongName, getMolecularWeight, setDescription, setLongName, setMolecularWeight, setShortName
public NucleotideCompound(java.lang.String base, CompoundSet<NucleotideCompound> compoundSet, java.lang.String complementStr)
public NucleotideCompound(java.lang.String base, CompoundSet<NucleotideCompound> compoundSet, java.lang.String complementStr, NucleotideCompound[] constituents)
public java.lang.String getShortName()
getShortName
in interface Compound
getShortName
in class AbstractCompound
public ComplementCompound getComplement()
getComplement
in interface ComplementCompound
public boolean equals(java.lang.Object obj)
equals
in class AbstractCompound
public int hashCode()
hashCode
in class AbstractCompound
public boolean equalsIgnoreCase(Compound compound)
equalsIgnoreCase
in interface Compound
equalsIgnoreCase
in class AbstractCompound
public java.util.Set<NucleotideCompound> getConstituents()
@Deprecated public java.util.Set<NucleotideCompound> getConsituents()
getConstituents()
due to typographical errorpublic boolean isAmbiguous()