Accessioned
, java.lang.Iterable<C>
, Sequence<C>
ProxySequenceReader<C>
ArrayListProxySequenceReader
, ArrayListSequenceReader
, BitSequenceReader
, FourBitSequenceReader
, GenbankProxySequenceReader
, JoiningSequenceReader
, RnaSequenceView
, SequenceFileProxyLoader
, SingleCompoundSequenceReader
, StringProxySequenceReader
, TwoBitSequenceReader
, UniprotProxySequenceReader
public interface SequenceReader<C extends Compound> extends Sequence<C>
Modifier and Type | Method | Description |
---|---|---|
void |
setCompoundSet(CompoundSet<C> compoundSet) |
|
void |
setContents(java.lang.String sequence) |
getAccession
countCompounds, getAsList, getCompoundAt, getCompoundSet, getIndexOf, getInverse, getLastIndexOf, getLength, getSequenceAsString, getSubSequence
void setCompoundSet(CompoundSet<C> compoundSet)
void setContents(java.lang.String sequence) throws CompoundNotFoundException
CompoundNotFoundException