RawBioUnitDataProvider
public class RemoteRawBioUnitDataProvider extends java.lang.Object implements RawBioUnitDataProvider
Modifier and Type | Field | Description |
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static java.lang.String |
DEFAULT_SERVERNAME |
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static java.lang.String |
GET_ASSEMBLY |
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static java.lang.String |
GET_ASSEMBLY_GENS |
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static java.lang.String |
GET_STRUCT_OPER |
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static java.lang.String |
NR_BIOL_APPEND |
Constructor | Description |
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RemoteRawBioUnitDataProvider() |
Modifier and Type | Method | Description |
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int |
getNrBiolAssemblies() |
Returns the number of available biological assemblies.
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java.util.List<PdbxStructAssembly> |
getPdbxStructAssemblies() |
Data access method for list describing all assemblies
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PdbxStructAssembly |
getPdbxStructAssembly(int biolAssemblyNr) |
get the data for a particular pdbxStructAssembly.
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java.util.List<PdbxStructAssemblyGen> |
getPdbxStructAssemblyGen(int biolAssemblyNr) |
get the data for a particular pdbxStructAssemblyGen.
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java.util.List<PdbxStructAssemblyGen> |
getPdbxStructAssemblyGens() |
Data access method for list describing all assemblies
|
java.util.List<PdbxStructOperList> |
getPdbxStructOperList() |
Get all the possible operators
|
int |
getTimeout() |
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boolean |
hasBiolAssembly() |
Does the PDB ID have biological assembly information?
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static void |
main(java.lang.String[] args) |
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void |
setPdbId(java.lang.String pdbId) |
Tell the provider for which PDB ID the quaternary structure should be returned.
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void |
setTimeout(int timeout) |
public static java.lang.String DEFAULT_SERVERNAME
public static java.lang.String NR_BIOL_APPEND
public static java.lang.String GET_ASSEMBLY
public static java.lang.String GET_ASSEMBLY_GENS
public static java.lang.String GET_STRUCT_OPER
public static void main(java.lang.String[] args)
public int getTimeout()
public void setTimeout(int timeout)
public void setPdbId(java.lang.String pdbId)
RawBioUnitDataProvider
setPdbId
in interface RawBioUnitDataProvider
public int getNrBiolAssemblies()
RawBioUnitDataProvider
getNrBiolAssemblies
in interface RawBioUnitDataProvider
public boolean hasBiolAssembly()
RawBioUnitDataProvider
hasBiolAssembly
in interface RawBioUnitDataProvider
public PdbxStructAssembly getPdbxStructAssembly(int biolAssemblyNr)
RawBioUnitDataProvider
getPdbxStructAssembly
in interface RawBioUnitDataProvider
public java.util.List<PdbxStructAssemblyGen> getPdbxStructAssemblyGen(int biolAssemblyNr)
RawBioUnitDataProvider
getPdbxStructAssemblyGen
in interface RawBioUnitDataProvider
public java.util.List<PdbxStructAssembly> getPdbxStructAssemblies()
RawBioUnitDataProvider
getPdbxStructAssemblies
in interface RawBioUnitDataProvider
public java.util.List<PdbxStructAssemblyGen> getPdbxStructAssemblyGens()
RawBioUnitDataProvider
getPdbxStructAssemblyGens
in interface RawBioUnitDataProvider
public java.util.List<PdbxStructOperList> getPdbxStructOperList()
RawBioUnitDataProvider
getPdbxStructOperList
in interface RawBioUnitDataProvider