public class DomainLengths
extends java.lang.Object
Constructor | Description |
---|---|
DomainLengths(java.lang.String domain_id) |
Modifier and Type | Method | Description |
---|---|---|
void |
addLength(Species species,
int domain_length) |
|
DescriptiveStatistics |
calculateMeanBasedStatistics() |
Returns descriptive statistics based on the arithmetic means
for each species.
|
double |
calculateZScoreForSpecies(Species species) |
Note.
|
java.lang.String |
getDomainId() |
|
DescriptiveStatistics |
getLengthStatistic(Species species) |
|
java.util.List<DescriptiveStatistics> |
getLengthStatisticsList() |
|
java.util.List<Species> |
getMeanBasedOutlierSpecies(double z_score_limit) |
|
java.util.List<Species> |
getSpeciesList() |
|
boolean |
isHasLengthStatistic(Species species) |
public void addLength(Species species, int domain_length)
public DescriptiveStatistics calculateMeanBasedStatistics()
public double calculateZScoreForSpecies(Species species)
species
- public java.lang.String getDomainId()
public DescriptiveStatistics getLengthStatistic(Species species)
public java.util.List<DescriptiveStatistics> getLengthStatisticsList()
public java.util.List<Species> getMeanBasedOutlierSpecies(double z_score_limit)
public java.util.List<Species> getSpeciesList()
public boolean isHasLengthStatistic(Species species)